RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 GEMIN2O14893 280 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 TO15178 435 aa9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 GPANK1O95872 356 aa9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 SUMO3P55854 103 aaPredicted RBP9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 PPP1CBP62140 327 aa9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 ASB13Q8WXK3 278 aa9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 ALKBH3Q96Q83 286 aaPredicted RBP9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 MAGT1Q9H0U3 335 aa9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 MED29Q9NX70 200 aa9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 ZFP36L2P47974 494 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 TFPI2P48307 235 aa9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 TMEM267Q0VDI3 215 aaPredicted RBP9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 ECSCRQ19T08 205 aa9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 CTU2Q2VPK5 515 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 GLCCI1Q86VQ1 547 aa9.9□□□□□ -0.82
CACNA1C-215ENST00000399637 TMPRSS2O15393 492 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 RHBDL1O75783 438 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 OR4E1P0C645 316 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 ARNTP27540 789 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 CD80P33681 288 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 OTUD1Q5VV17 481 aaPredicted RBP9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 Q8IYB0 196 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 OR4C3Q8NH37 302 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 C16orf52Q8NHV5 167 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 PERPQ96FX8 193 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 NIT2Q9NQR4 276 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 AMDHD2Q9Y303 409 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 PPOXP50336 477 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 ZNF793Q6ZN11 406 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 MYPOPQ86VE0 399 aaPredicted RBP9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 ACER3Q9NUN7 267 aa9.9□□□□□ -0.83
CACNA1C-215ENST00000399637 ZBTB42B2RXF5 422 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 LINC01387J3KSC0 135 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 M0R1X1 148 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 ZNF354AO60765 605 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 CALCRP30988 508 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 FOXF1Q12946 379 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 ETFDHQ16134 617 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 RELL2Q8NC24 303 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 ADPRHL1Q8NDY3 354 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 TTC9Q92623 222 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 KTI12Q96EK9 354 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 TRAPPC1Q9Y5R8 145 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 KLKB1P03952 638 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 FGF2P09038 288 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 FAM3AP98173 230 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 CEACAM16Q2WEN9 425 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 ZNF528Q3MIS6 628 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 MOGAT2Q3SYC2 334 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 MARCH1Q8TCQ1 289 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 TMED6Q8WW62 240 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 IL22RA2Q969J5 263 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 HSD17B10Q99714 261 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 DUSP21Q9H596 190 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 TBX21Q9UL17 535 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 U3KQ87 197 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 IGHV1OR15-9A0A0B4J2B8 117 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 SHISA8B8ZZ34 492 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 UBE2L6O14933 153 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 TSPAN13O95857 204 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 C1QBP02746 253 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 VDAC1P21796 283 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 RBM11P57052 281 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 B2MP61769 119 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 PAX5Q02548 391 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 STAC2Q6ZMT1 411 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 OR1L4Q8NGR5 311 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 NUDCD2Q8WVJ2 157 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 TRIM77I1YAP6 450 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 TRAT1Q6PIZ9 186 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 SAP30LQ9HAJ7 183 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 FKBP11Q9NYL4 201 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 DEFB108AA8MXU0 73 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 ZNF205O95201 554 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 ARG1P05089 322 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 IL5P05113 134 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 MGMTP16455 207 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 CDAP32320 146 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 DEFB121Q5J5C9 76 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 OR52N4Q8NGI2 321 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 A4GNTQ9UNA3 340 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 FOXJ3Q9UPW0 622 aa9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 SOX21Q9Y651 276 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-215ENST00000399637 AQP6Q13520 282 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 LYG1Q8N1E2 194 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 NEIL1Q96FI4 390 aaPredicted RBP9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 LHX9Q9NQ69 397 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 ASAH1Q13510 395 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 OR1F12Q8NHA8 337 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 GABARAPL3Q9BY60 117 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 KIF13BQ9NQT8 1826 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 SLC25A17O43808 307 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 HRASP01112 189 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 CEACAM6P40199 344 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 SLC25A30Q5SVS4 291 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 SYS1Q8N2H4 156 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 TMEM229BQ8NBD8 167 aa9.88□□□□□ -0.83
CACNA1C-215ENST00000399637 SFRP2Q96HF1 295 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms