RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PKDREJQ9NTG1 2253 aa23.3■■□□□ 1.32
CPNE1-203ENST00000397442 A0A0A6YYH2 397 aa23.3■■□□□ 1.32
CPNE1-203ENST00000397442 A6NJ64 397 aa23.3■■□□□ 1.32
CPNE1-203ENST00000397442 IGHV1-46P01743 117 aa23.3■■□□□ 1.32
CPNE1-203ENST00000397442 GTF2F2P13984 249 aa23.3■■□□□ 1.32
CPNE1-203ENST00000397442 VEGFCP49767 419 aa23.3■■□□□ 1.32
CPNE1-203ENST00000397442 EFNB3Q15768 340 aa23.3■■□□□ 1.32
CPNE1-203ENST00000397442 ELP2Q6IA86 826 aa23.3■■□□□ 1.32
CPNE1-203ENST00000397442 RBFOX1Q9NWB1 397 aaKnown RBP23.3■■□□□ 1.32
CPNE1-203ENST00000397442 KLF2Q9Y5W3 355 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-203ENST00000397442 CHD3Q12873 2000 aaKnown RBP23.3■■□□□ 1.32
CPNE1-203ENST00000397442 UPK1BO75841 260 aa23.29■■□□□ 1.32
CPNE1-203ENST00000397442 TPPPO94811 219 aa23.29■■□□□ 1.32
CPNE1-203ENST00000397442 MZT1Q08AG7 82 aa23.29■■□□□ 1.32
CPNE1-203ENST00000397442 PHF21AQ96BD5 680 aa23.29■■□□□ 1.32
CPNE1-203ENST00000397442 ZNF488Q96MN9 340 aa23.29■■□□□ 1.32
CPNE1-203ENST00000397442 URM1Q9BTM9 101 aaKnown RBP23.29■■□□□ 1.32
CPNE1-203ENST00000397442 PALMDQ9NP74 551 aa23.29■■□□□ 1.32
CPNE1-203ENST00000397442 RABL2AQ9UBK7 228 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-203ENST00000397442 ZDHHC8Q9ULC8 765 aa23.29■■□□□ 1.32
CPNE1-203ENST00000397442 RABL2BQ9UNT1 228 aa23.29■■□□□ 1.32
CPNE1-203ENST00000397442 TRAV18A0A075B6X5 111 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 FOXI3A8MTJ6 420 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-203ENST00000397442 TRAPPC2LH3BP13 241 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 CYB5AP00167 134 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 PTHLHP12272 177 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 DAZAP2Q15038 168 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-203ENST00000397442 RAB12Q6IQ22 244 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 C16orf87Q6PH81 154 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 FBXL14Q8N1E6 418 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 OSR2Q8N2R0 312 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 Q8N402 240 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 OR51T1Q8NGJ9 327 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 MRPS24Q96EL2 167 aaKnown RBP23.28■■□□□ 1.32
CPNE1-203ENST00000397442 MEGF10Q96KG7 1140 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 OR2V2Q96R30 315 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 HRNRQ86YZ3 2850 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-203ENST00000397442 SOCS1O15524 211 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 CHRM2P08172 466 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 ADH4P08319 380 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 CSF3P09919 207 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 ERVK11-1P61568 191 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 PITPNAQ00169 270 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 ZNF826PQ6ZT77 177 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 RTN4RL2Q86UN3 420 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 OR10R2Q8NGX6 335 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 GCDHQ92947 438 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-203ENST00000397442 NUDT16L1Q9BRJ7 211 aaKnown RBP23.28■■□□□ 1.32
CPNE1-203ENST00000397442 PCDHB16Q9NRJ7 776 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 POLDIP2Q9Y2S7 368 aa23.28■■□□□ 1.32
CPNE1-203ENST00000397442 C3orf80F5H4A9 247 aa23.27■■□□□ 1.32
CPNE1-203ENST00000397442 CTDSPLO15194 276 aa23.27■■□□□ 1.32
CPNE1-203ENST00000397442 TMEM50BP56557 158 aa23.27■■□□□ 1.32
CPNE1-203ENST00000397442 FAM189A2Q15884 450 aa23.27■■□□□ 1.32
CPNE1-203ENST00000397442 PIGYQ3MUY2 71 aa23.27■■□□□ 1.32
CPNE1-203ENST00000397442 MEX3BQ6ZN04 569 aaKnown RBP23.27■■□□□ 1.32
CPNE1-203ENST00000397442 CELF2-AS1Q8N7Q2 184 aa23.27■■□□□ 1.32
CPNE1-203ENST00000397442 ABCB10Q9NRK6 738 aa23.27■■□□□ 1.32
CPNE1-203ENST00000397442 UFSP2Q9NUQ7 469 aa23.27■■□□□ 1.32
CPNE1-203ENST00000397442 A0A1W2PPR1 153 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 C17orf100A8MU93 164 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 M0R233 179 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 SCGNO76038 276 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 ACAA1P09110 424 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-203ENST00000397442 PGA5P0DJD9 388 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 CPT2P23786 658 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 FGF12P61328 243 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 SWI5Q1ZZU3 235 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 PLAC9Q5JTB6 97 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 WDR82Q6UXN9 313 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 OR56B1Q8NGI3 324 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 CYYR1Q96J86 154 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 NRIP2Q9BQI9 281 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 ZNF581Q9P0T4 197 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 COL12A1Q99715 3063 aa23.26■■□□□ 1.31
CPNE1-203ENST00000397442 B9A039 149 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 IL7P13232 177 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 RBM11P57052 281 aaKnown RBP23.25■■□□□ 1.31
CPNE1-203ENST00000397442 DGCR2P98153 550 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 OR8H2Q8N162 312 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 ITLN1Q8WWA0 313 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 AUNIPQ9H7T9 357 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 IL36RNQ9UBH0 155 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 IL19Q9UHD0 177 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 ST3GAL6Q9Y274 331 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 ARFGEF3Q5TH69 2177 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 CACNA1DQ01668 2161 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 A6NLC8 198 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 AKR7A2O43488 359 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 NOS1APO75052 506 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-203ENST00000397442 GATA4P43694 442 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 TNFAIP6P98066 277 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-203ENST00000397442 TAF9Q16594 264 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 ZNF181Q2M3W8 571 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 ZNF260Q3ZCT1 412 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 NHLRC3Q5JS37 347 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 SIGIRRQ6IA17 410 aa23.25■■□□□ 1.31
CPNE1-203ENST00000397442 ZCCHC24Q8N2G6 241 aaKnown RBP23.25■■□□□ 1.31
CPNE1-203ENST00000397442 ZMAT3Q9HA38 289 aaKnown RBP23.25■■□□□ 1.31
CPNE1-203ENST00000397442 CLEC18AA5D8T8 446 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms