RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ZMYND11Q15326 602 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 KISS1Q15726 138 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 ZNF101Q8IZC7 436 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 FAM89BQ8N5H3 189 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 ASCC1Q8N9N2 400 aaKnown RBP12.79□□□□□ -0.36
CAPN3-207ENST00000397200 TMEM104Q8NE00 496 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 OR51S1Q8NGJ8 323 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 GAL3ST1Q99999 423 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 TMEM246Q9BRR3 403 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 C1QTNF5Q9BXJ0 243 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 ALX4Q9H161 411 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-207ENST00000397200 RGCCQ9H4X1 137 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 RANBP3Q9H6Z4 567 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-207ENST00000397200 GPN1Q9HCN4 374 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-207ENST00000397200 PIGLQ9Y2B2 252 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 BOLA1Q9Y3E2 137 aa12.79□□□□□ -0.36
CAPN3-207ENST00000397200 ANKHD1Q8IWZ3 2542 aaKnown RBP12.79□□□□□ -0.36
CAPN3-207ENST00000397200 DPRXA6NFQ7 191 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 SMLR1H3BR10 107 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 SSNA1O43805 119 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 CREBL2O60519 120 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-207ENST00000397200 VSIG10L2P0DP72 767 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 TBPP20226 339 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 ACKR3P25106 362 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 CALCRP30988 508 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 WNT5AP41221 380 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 BSPH1Q075Z2 132 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 MEF2DQ14814 521 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 CDNFQ49AH0 187 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 BEX5Q5H9J7 111 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 TMEM42Q69YG0 159 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 MEX3BQ6ZN04 569 aaKnown RBP12.78□□□□□ -0.36
CAPN3-207ENST00000397200 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 PNLDC1Q8NA58 520 aaKnown RBP12.78□□□□□ -0.36
CAPN3-207ENST00000397200 SEMA6DQ8NFY4 1073 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 FAM222BQ8WU58 562 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 SPSB1Q96BD6 273 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 CMBLQ96DG6 245 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 REEP6Q96HR9 211 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 FAM210AQ96ND0 272 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 SLC25A21Q9BQT8 299 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-207ENST00000397200 SEC22CQ9BRL7 303 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 TMEM59Q9BXS4 323 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 GON7Q9BXV9 100 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 BEX1Q9HBH7 125 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 DLL4Q9NR61 685 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 ZNF222Q9UK12 451 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 ADGRG4Q8IZF6 3080 aa12.78□□□□□ -0.36
CAPN3-207ENST00000397200 ZNF736B4DX44 427 aaPredicted RBP12.77□□□□□ -0.36
CAPN3-207ENST00000397200 G3V3Q6 166 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 MFNGO00587 321 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 SSX5O60225 188 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 NAT1P18440 290 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 PTGFRP43088 359 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 RPS27AP62979 156 aaKnown RBP12.77□□□□□ -0.36
CAPN3-207ENST00000397200 PNLIPRP3Q17RR3 467 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 NCMAPQ5T1S8 102 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 UNQ6126/PRO20091Q6UXV3 157 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 COLCA1Q6ZS62 124 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 TRAPPC6BQ86SZ2 158 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 DVL3Q92997 716 aaPredicted RBP12.77□□□□□ -0.36
CAPN3-207ENST00000397200 SPSB4Q96A44 273 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 APOBEC3DQ96AK3 386 aaPredicted RBP12.77□□□□□ -0.36
CAPN3-207ENST00000397200 PLPPR2Q96GM1 343 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 NICN1Q9BSH3 213 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 TM2D1Q9BX74 207 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 ZNF436Q9C0F3 470 aaPredicted RBP12.77□□□□□ -0.36
CAPN3-207ENST00000397200 TINAGL1Q9GZM7 467 aaPredicted RBP12.77□□□□□ -0.36
CAPN3-207ENST00000397200 OR51B6Q9H340 312 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 ZMAT3Q9HA38 289 aaKnown RBP12.77□□□□□ -0.36
CAPN3-207ENST00000397200 SCP2D1Q9UJQ7 156 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 ING4Q9UNL4 249 aa12.77□□□□□ -0.36
CAPN3-207ENST00000397200 hCG_38984A0A1B0GV85 526 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-207ENST00000397200 J3QW42 95 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 ABCD4O14678 606 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 SMPD2O60906 423 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 MPIG6BO95866 241 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 HIST1H1DP16402 221 aaKnown RBP12.77□□□□□ -0.37
CAPN3-207ENST00000397200 UCP2P55851 309 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 NDUFA5Q16718 116 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 PLAC9Q5JTB6 97 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 OR56B1Q8NGI3 324 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 DACT3Q96B18 629 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-207ENST00000397200 RADILQ96JH8 1075 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 GPER1Q99527 375 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 URM1Q9BTM9 101 aaKnown RBP12.77□□□□□ -0.37
CAPN3-207ENST00000397200 CST11Q9H112 138 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 SPEF1Q9Y4P9 236 aa12.77□□□□□ -0.37
CAPN3-207ENST00000397200 A1L4Q6 167 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 ATP6V1G2-DDX39BF2Z307 99 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 CLDN1O95832 211 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 NGFP01138 241 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 CD3EP07766 207 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 GNB3P16520 340 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 TMEM50BP56557 158 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 RIPPLY1Q0D2K3 151 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 OR8B8Q15620 311 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 ZBTB37Q5TC79 503 aa12.76□□□□□ -0.37
CAPN3-207ENST00000397200 SLC22A25Q6T423 547 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms