RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PTGDSP41222 190 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 AKR1C3P42330 323 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 LSM6P62312 80 aaKnown RBP11.64□□□□□ -0.55
TRIM40-207ENST00000396581 FABP9Q0Z7S8 132 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 GPR157Q5UAW9 335 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 C1QL4Q86Z23 238 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 ZNF283Q8N7M2 679 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 HPSE2Q8WWQ2 592 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 YPEL4Q96NS1 127 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 OXGR1Q96P68 337 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 CHST5Q9GZS9 411 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 SDHAF3Q9NRP4 125 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 LUZP4Q9P127 313 aa11.64□□□□□ -0.55
TRIM40-207ENST00000396581 STRAPQ9Y3F4 350 aaKnown RBP11.64□□□□□ -0.55
TRIM40-207ENST00000396581 C5orf63A6NC05 138 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 A6NLC8 198 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 GPR137BO60478 399 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 DHRS3O75911 302 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 MBPP02686 304 aaPredicted RBP11.63□□□□□ -0.55
TRIM40-207ENST00000396581 SNRNP70P08621 437 aaKnown RBP11.63□□□□□ -0.55
TRIM40-207ENST00000396581 ZNF133P52736 654 aaPredicted RBP11.63□□□□□ -0.55
TRIM40-207ENST00000396581 TMEM187Q14656 261 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 CCDC54Q8NEL0 328 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 OR5D18Q8NGL1 313 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 Q96M66 194 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 GNRHR2Q96P88 292 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 WFDC1Q9HC57 220 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 ANXA10Q9UJ72 324 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 PADI1Q9ULC6 663 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 LSM5Q9Y4Y9 91 aaKnown RBP11.63□□□□□ -0.55
TRIM40-207ENST00000396581 IGLV3-12A0A075B6K2 115 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 BORCS7-ASMTA0A0B4J1R7 106 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 IGHV3-20A0A0C4DH32 117 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 IGHV5-10-1A0A0J9YXX1 117 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 A0A1W2PPH5 198 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 ZNF814B7Z6K7 855 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 QDPRP09417 244 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 CBR1P16152 277 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 SERPINA2P20848 420 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 S100PP25815 95 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 ZNF41P51814 821 aaPredicted RBP11.63□□□□□ -0.55
TRIM40-207ENST00000396581 RAB1AP62820 205 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 C1orf189Q5VU69 101 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 RPUSD3Q6P087 351 aaKnown RBP11.63□□□□□ -0.55
TRIM40-207ENST00000396581 LINC00469Q8N7U9 141 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 OR1J1Q8NGS3 322 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 BSCL2Q96G97 398 aaPredicted RBP11.63□□□□□ -0.55
TRIM40-207ENST00000396581 SMIM3Q9BZL3 60 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 LIME1Q9H400 295 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 SMDT1Q9H4I9 107 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 SPACA1Q9HBV2 294 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 NIT2Q9NQR4 276 aa11.63□□□□□ -0.55
TRIM40-207ENST00000396581 ZNF701Q9NV72 531 aaPredicted RBP11.63□□□□□ -0.55
TRIM40-207ENST00000396581 H7C1Q1 480 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 IGHV2-70P01814 119 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 ZNF14P17017 642 aaPredicted RBP11.62□□□□□ -0.55
TRIM40-207ENST00000396581 OTX1P32242 354 aaPredicted RBP11.62□□□□□ -0.55
TRIM40-207ENST00000396581 RHBDD2Q6NTF9 364 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 FOXL2NBQ6ZUU3 175 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 C6orf201Q7Z4U5 140 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 DTX1Q86Y01 620 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 TMEM156Q8N614 296 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 SLC38A9Q8NBW4 561 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 ISOC2Q96AB3 205 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 LIN37Q96GY3 246 aaPredicted RBP11.62□□□□□ -0.55
TRIM40-207ENST00000396581 PGAM5Q96HS1 289 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 C18orf12Q96KH6 178 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 NAA60Q9H7X0 242 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 C19orf12Q9NSK7 152 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 HSF4Q9ULV5 492 aa11.62□□□□□ -0.55
TRIM40-207ENST00000396581 NME2P1O60361 137 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 DTYMKP23919 212 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 SULT1A1P50225 295 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 DUSP3P51452 185 aaPredicted RBP11.61□□□□□ -0.55
TRIM40-207ENST00000396581 HIST1H3AP68431 136 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 SLC35A1P78382 337 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 IL13RA2Q14627 380 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 FAM209BQ5JX69 171 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 HIST2H3PS2Q5TEC6 136 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 HIST2H3AQ71DI3 136 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 GALNTL5Q7Z4T8 443 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 ANKRD37Q7Z713 158 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 LFNGQ8NES3 379 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 IFI44Q8TCB0 444 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 STT3BQ8TCJ2 826 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 SUCNR1Q9BXA5 334 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 SLC35B3Q9H1N7 401 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 TINAGQ9UJW2 476 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 ZDHHC8Q9ULC8 765 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 KCNIP3Q9Y2W7 256 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 CACNA1HO95180 2353 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 AQP7P3A6NL99 342 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 UMAD1C9J7I0 102 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 AP4M1O00189 453 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 PPIHO43447 177 aaKnown RBP11.61□□□□□ -0.55
TRIM40-207ENST00000396581 CLN5O75503 358 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 OR5H8P0DN80 308 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 FCGR2AP12318 317 aa11.61□□□□□ -0.55
TRIM40-207ENST00000396581 EIF2S3P41091 472 aaKnown RBP11.61□□□□□ -0.55
TRIM40-207ENST00000396581 PIGPP57054 158 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms