RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 DUSP18Q8NEJ0 188 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 GTF3AQ92664 365 aaKnown RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 SLAMF9Q96A28 289 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 SLC22A4Q9H015 551 aa10.81□□□□□ -0.68
TRIM39-204ENST00000396548 RBFOX1Q9NWB1 397 aaKnown RBP10.81□□□□□ -0.68
TRIM39-204ENST00000396548 TMEM235A6NFC5 223 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 SHISA9B4DS77 424 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 HTR3BO95264 441 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 LPLP06858 475 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 AGAP20933 346 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 ZNF154Q13106 437 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 PIGYQ3MUY2 71 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 Q6ZTK2 550 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 MKXQ8IYA7 352 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 SCCPDHQ8NBX0 429 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 ARHGAP5-AS1Q96IT6 56 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 FAM210AQ96ND0 272 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 S100A13Q99584 98 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 PECRQ9BY49 303 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 MRPL37Q9BZE1 423 aaKnown RBP10.8□□□□□ -0.68
TRIM39-204ENST00000396548 ZNF442Q9H7R0 627 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 CACNG2Q9Y698 323 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 ABCD4O14678 606 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 SIAH2O43255 324 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 TIMM8AO60220 97 aaPredicted RBP10.8□□□□□ -0.68
TRIM39-204ENST00000396548 RHBDL1O75783 438 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 GSTP1P09211 210 aaKnown RBP10.8□□□□□ -0.68
TRIM39-204ENST00000396548 SLC6A1P30531 599 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 RBM11P57052 281 aaKnown RBP10.8□□□□□ -0.68
TRIM39-204ENST00000396548 OR8G1Q15617 311 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 PRR7Q8TB68 274 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 MRPL24Q96A35 216 aaKnown RBP10.8□□□□□ -0.68
TRIM39-204ENST00000396548 PHF21AQ96BD5 680 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 RAB3CQ96E17 227 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 MICU1Q9BPX6 476 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 RHOFQ9HBH0 211 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 HSF4Q9ULV5 492 aa10.8□□□□□ -0.68
TRIM39-204ENST00000396548 J3QT63 122 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 CPT2P23786 658 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FGF12P61328 243 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 PLA1AQ53H76 456 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 HAGHLQ6PII5 290 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 TOMM5Q8N4H5 51 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 ITLN2Q8WWU7 325 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 CA11O75493 328 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 KLF3P57682 345 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 RPS23P62266 143 aaKnown RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 ZNF57Q68EA5 555 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 CCBE1Q6UXH8 406 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FBXL14Q8N1E6 418 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 OR10AD1Q8NGE0 317 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 OR8S1Q8NH09 359 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 CA5BP1Q8WTZ4 195 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 CXXC4Q9H2H0 198 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 HES4Q9HCC6 221 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 MSL2Q9HCI7 577 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 NPDC1Q9NQX5 325 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 CA10Q9NS85 328 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 LINC00854A0A1B0GVQ3 168 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A10PA6NDY2 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A18PA6NE21 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A16PA6NEW6 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A20PA6NIJ5 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 ZSCAN5BA6NJL1 495 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A8PA6NJQ4 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A7PA6NKC0 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A22PA8MWA6 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A12PA8MX19 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A5PA8MXJ8 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A23PA8MXZ1 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 GEMIN2O14893 280 aaKnown RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 NOS1APO75052 506 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 ECDO95905 644 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A15PP0C7V4 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A13PP0C7W8 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A14PP0C7W9 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 FAM90A24PP0C7X0 464 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 CHATP28329 748 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 CD200P41217 278 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 SNTB1Q13884 538 aaKnown RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 PNLIPRP3Q17RR3 467 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 OR13G1Q8NGZ3 307 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 LINC01560Q8TB33 94 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 DEDD2Q8WXF8 326 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 C7orf50Q9BRJ6 194 aaKnown RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 ELL3Q9HB65 397 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 HRASLSQ9HDD0 168 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 KCNJ16Q9NPI9 418 aa10.79□□□□□ -0.68
TRIM39-204ENST00000396548 ZNF107Q9UII5 783 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-204ENST00000396548 SPTA1P02549 2419 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 F5H5P2 479 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 NAT1P18440 290 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 ADIPOQQ15848 244 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 PCDHB16Q9NRJ7 776 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 FAIMQ9NVQ4 179 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 ST3GAL6Q9Y274 331 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 PCNX1Q96RV3 2341 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 RBBP9O75884 186 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 CSTBP04080 98 aaKnown RBP10.78□□□□□ -0.68
TRIM39-204ENST00000396548 PGA5P0DJD9 388 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms