RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 OR8B4Q96RC9 309 aa14.09□□□□□ -0.15
EXOSC3-202ENST00000396521 FAM206AQ9NX38 181 aa14.09□□□□□ -0.15
EXOSC3-202ENST00000396521 DNAJB9Q9UBS3 223 aa14.09□□□□□ -0.15
EXOSC3-202ENST00000396521 TSSC4Q9Y5U2 329 aaPredicted RBP14.09□□□□□ -0.15
EXOSC3-202ENST00000396521 TMEM14AQ9Y6G1 99 aa14.09□□□□□ -0.15
EXOSC3-202ENST00000396521 U3KQV3 271 aa14.09□□□□□ -0.15
EXOSC3-202ENST00000396521 B2RBV5 119 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 IGLV3-1P01715 115 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 PF4P02776 101 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 ROM1Q03395 351 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 MEF2CQ06413 473 aaPredicted RBP14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 IL18R1Q13478 541 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 ZNF273Q14593 569 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 ZNF829Q3KNS6 432 aaPredicted RBP14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 CLVS2Q5SYC1 327 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 DEFB107AQ8IZN7 70 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 DYNAPQ8N1N2 210 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 OR5M11Q96RB7 305 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 PBOV1Q9GZY1 135 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 HES4Q9HCC6 221 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 GPR84Q9NQS5 396 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 NUFIP1Q9UHK0 495 aaKnown RBP14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 PIGLQ9Y2B2 252 aa14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 KMT2CQ8NEZ4 4911 aaKnown RBP14.08□□□□□ -0.16
EXOSC3-202ENST00000396521 DHRS7CA6NNS2 312 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 FAM90A22PA8MWA6 464 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 DNAJC8O75937 253 aaPredicted RBP14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 CHRM2P08172 466 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 IGHV1-8P0DP01 117 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 MPZP25189 248 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 BLCAPP62952 87 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 PLA1AQ53H76 456 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 CYP2R1Q6VVX0 501 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 GDPD3Q7L5L3 318 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 CENPVQ7Z7K6 275 aaPredicted RBP14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 ZNF679Q8IYX0 411 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 IQCF1Q8N6M8 205 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 OR51E1Q8TCB6 317 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 GIPC3Q8TF64 312 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 CAPSLQ8WWF8 208 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 FEVQ99581 238 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 NIPSNAP1Q9BPW8 284 aa14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 ZMAT5Q9UDW3 170 aaKnown RBP14.07□□□□□ -0.16
EXOSC3-202ENST00000396521 hADV38S2A0JD32 116 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 E9PQ18 207 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 K7EIL1 84 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 SYNGR1O43759 233 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 HOXB6P17509 224 aaKnown RBP14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 ARHGDIBP52566 201 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 ACTR3P61158 418 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 RPS7P62081 194 aaKnown RBP14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 PPP1R8Q12972 351 aaKnown RBP14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 DYNC1I2Q13409 638 aaKnown RBP14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 GINS1Q14691 196 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 DEFB121Q5J5C9 76 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 TMEM42Q69YG0 159 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 CPOQ8IVL8 374 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 DPF1Q92782 380 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 ZNF714Q96N38 554 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 PKIBQ9C010 78 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 MOB1AQ9H8S9 216 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 LIN7BQ9HAP6 207 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 SEBOXQ9HB31 216 aaPredicted RBP14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 OR14J1Q9UGF5 321 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 SLC22A13Q9Y226 551 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 KLHDC2Q9Y2U9 406 aa14.06□□□□□ -0.16
EXOSC3-202ENST00000396521 TCRBV4S1A1TA0A5B7 111 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 PQLC2LA1A4F0 135 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 PIPP12273 146 aaPredicted RBP14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 RIDAP52758 137 aaKnown RBP14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 ERVK11-1P61568 191 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 SLC34A1Q06495 639 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 IL24Q13007 206 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 DHFR2Q86XF0 187 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 ASCC1Q8N9N2 400 aaKnown RBP14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 OR4X2Q8NGF9 303 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 ZNF488Q96MN9 340 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 WWC2-AS2Q96NR7 200 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 TEAD3Q99594 435 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 ZNF556Q9HAH1 456 aa14.05□□□□□ -0.16
EXOSC3-202ENST00000396521 DNAH3Q8TD57 4116 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 TCRBV5S2A0A599 114 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 ATP6V1B2P21281 511 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 BRS3P32247 399 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 EDDM3BP56851 147 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 ACTA2P62736 377 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 ACTG2P63267 376 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 ACTC1P68032 377 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 ACTA1P68133 377 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 EGFEM1PQ0D2K5 195 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 DNAL1Q4LDG9 190 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 OR8H2Q8N162 312 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 NDNFQ8TB73 568 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 VNN3Q9NY84 501 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 HILPDAQ9Y5L2 63 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 LINC00312Q9Y6C7 94 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 SESN1Q9Y6P5 492 aa14.04□□□□□ -0.16
EXOSC3-202ENST00000396521 A0A1W2PRX2 142 aa14.03□□□□□ -0.16
EXOSC3-202ENST00000396521 ZNF737O75373 536 aa14.03□□□□□ -0.16
EXOSC3-202ENST00000396521 RAP2AP10114 183 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms