RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 FLI1Q01543 452 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 ZNF763Q0D2J5 394 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 EDDM3AQ14507 147 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 SIX1Q15475 284 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 TOMM34Q15785 309 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 TNFAIP8L2Q6P589 184 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 REG3GQ6UW15 175 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 C17orf82Q86X59 251 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 CIARTQ8N365 385 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 NPWQ8N729 165 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 BEST4Q8NFU0 473 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 OR2Z1Q8NG97 314 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 OR6T1Q8NGN1 323 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 SLC37A2Q8TED4 501 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 ZFP90Q8TF47 636 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 LRRC29Q8WV35 223 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 TAF15Q92804 592 aaKnown RBP eCLIP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 SFRP2Q96HF1 295 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 RDH12Q96NR8 316 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 BIRC8Q96P09 236 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 SIGMAR1Q99720 223 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 ZNF2Q9BSG1 426 aaPredicted RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 FAAP24Q9BTP7 215 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 CLEC7AQ9BXN2 247 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 YTHDF1Q9BYJ9 559 aaKnown RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 FBXL15Q9H469 300 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 TMEM100Q9NV29 134 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 NYAP2Q9P242 653 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 XCL2Q9UBD3 114 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 PAIP2BQ9ULR5 123 aaKnown RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 PRELID3BQ9Y3B1 194 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 LSM5Q9Y4Y9 91 aaKnown RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 CCDC144AA2RUR9 1427 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 MIA2Q96PC5 1412 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 ARAP3Q8WWN8 1544 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 GPATCH8Q9UKJ3 1502 aaKnown RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 GCC2Q8IWJ2 1684 aa3.88□□□□□ -1.79
GABPB1-204ENST00000396464 PPRC1Q5VV67 1664 aaKnown RBP3.88□□□□□ -1.79
GABPB1-204ENST00000396464 DENND4BO75064 1496 aaPredicted RBP3.87□□□□□ -1.79
GABPB1-204ENST00000396464 ZNF518AQ6AHZ1 1483 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 NEO1Q92859 1461 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 PLCH2O75038 1416 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 RIMS2Q9UQ26 1411 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 FAM220BPB1ANY3 271 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 OR11H12B2RN74 326 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 H7C417 338 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 UPK1BO75841 260 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 HPNP05981 417 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 RNF224P0DH78 156 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 TAC1P20366 129 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 F2RP25116 425 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 CHRNB4P30926 498 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 CCR7P32248 378 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 BTCP35070 178 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 GGT2P36268 569 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 GCLMP48507 274 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 SELENOTP62341 195 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 PRDX1Q06830 199 aaKnown RBP3.87□□□□□ -1.79
GABPB1-204ENST00000396464 EIF4EBP2Q13542 120 aaPredicted RBP3.87□□□□□ -1.79
GABPB1-204ENST00000396464 GINS1Q14691 196 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 ZNF146Q15072 292 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 CCDC153Q494R4 210 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 CDNFQ49AH0 187 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 TMEM97Q5BJF2 176 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 FAM71E1Q6IPT2 247 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 ZNF620Q6ZNG0 422 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 OLIG3Q7RTU3 272 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 CDC20BQ86Y33 519 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 ZNF676Q8N7Q3 588 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 ARIH2OSQ8N7S6 290 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 TMEM161BQ8NDZ6 487 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 OR11H1Q8NG94 326 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 OR10AD1Q8NGE0 317 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 OR11H2Q8NH07 326 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 OR9G1Q8NH87 305 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 EEF1AKMT1Q8WVE0 214 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 BORCS5Q969J3 196 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 YIPF5Q969M3 257 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 BTN2A3PQ96KV6 586 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 HIST1H4GQ99525 98 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 MED18Q9BUE0 208 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 MTFP1Q9UDX5 166 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 PROCRQ9UNN8 238 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 TP53TG5Q9Y2B4 290 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 ADAMTSL3P82987 1691 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 ARHGEF5Q12774 1597 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 ATP7AQ04656 1500 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 DAPK1P53355 1430 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 SCAPERQ9BY12 1400 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 RRBP1Q9P2E9 1410 aaKnown RBP3.87□□□□□ -1.79
GABPB1-204ENST00000396464 A0A1W2PP64 1363 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 PCDH11XQ9BZA7 1347 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 A0A087WW49 117 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 RBFOX3A6NFN3 312 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 DHRS7CA6NNS2 312 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 TRIM49D1C9J1S8 452 aa3.87□□□□□ -1.79
GABPB1-204ENST00000396464 K7N7A8 449 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms