RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 EDARQ9UNE0 448 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 OSGIN2Q9Y236 505 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 STARD10Q9Y365 291 aa12.9□□□□□ -0.34
CBX3-202ENST00000396386 ZNHIT1O43257 154 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 CEACAM4O75871 244 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 MPC2O95563 127 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 DUS4LO95620 317 aaKnown RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 IFNA7P01567 189 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 DTYMKP23919 212 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 RBM11P57052 281 aaKnown RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 ARPC4P59998 168 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 SRSF4Q08170 494 aaKnown RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 HLXQ14774 488 aaPredicted RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 OPCMLQ14982 345 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 RTP5Q14D33 572 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 RPUSD3Q6P087 351 aaKnown RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 TFAP2EQ6VUC0 442 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 PEG10Q86TG7 708 aaKnown RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 MDP1Q86V88 176 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 MED12LQ86YW9 2145 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 CASTOR1Q8WTX7 329 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 TRIB1Q96RU8 372 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 CMSS1Q9BQ75 279 aaKnown RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 HDHD3Q9BSH5 251 aaPredicted RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 FAAP24Q9BTP7 215 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 GPR132Q9UNW8 380 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 ST3GAL6Q9Y274 331 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 MCRIP1C9JLW8 97 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 SDCBPO00560 298 aaPredicted RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 GEMIN2O14893 280 aaKnown RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 ARPC5O15511 151 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 RRP8O43159 456 aaKnown RBP12.89□□□□□ -0.35
CBX3-202ENST00000396386 NGFP01138 241 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 CD8AP01732 235 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 SFTPBP07988 381 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 PPP3CBP16298 524 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 SORDQ00796 357 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 FGL1Q08830 312 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 SLC25A26Q70HW3 274 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 CALHM1Q8IU99 346 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 SLC30A7Q8NEW0 376 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 TMEM185AQ8NFB2 350 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 HPSE2Q8WWQ2 592 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 PDCD10Q9BUL8 212 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 C5orf66Q9H5L9 145 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 TMEM165Q9HC07 324 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 KCNMB2Q9Y691 235 aa12.89□□□□□ -0.35
CBX3-202ENST00000396386 RFPL4AA6NLU0 287 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 RFPL4AL1F8VTS6 287 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 ERVH48-1M5A8F1 160 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 CCSO14618 274 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 PDCD6O75340 191 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 HLA-GP17693 338 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 WNT5AP41221 380 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 CEACAM21Q3KPI0 293 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 TMEM128Q5BJH2 165 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 OVCH2Q7RTZ1 564 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 SAXO1Q8IYX7 474 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 OR10AD1Q8NGE0 317 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 OR5L1Q8NGL2 311 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 SARAFQ96BY9 339 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 WBP1Q96G27 269 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 SULT4A1Q9BR01 284 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 CRIM1Q9NZV1 1036 aa12.88□□□□□ -0.35
CBX3-202ENST00000396386 CD300LBA8K4G0 201 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 TM4SF5O14894 197 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 FCGR3AP08637 254 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 ECI1P42126 302 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 TGFBR3Q03167 851 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 EXOSC2Q13868 293 aaKnown RBP12.87□□□□□ -0.35
CBX3-202ENST00000396386 SURF2Q15527 256 aaPredicted RBP12.87□□□□□ -0.35
CBX3-202ENST00000396386 TBC1D28Q2M2D7 210 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 AADACL3Q5VUY0 350 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 NSUN5P2Q63ZY6 315 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 RFPL4BQ6ZWI9 263 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 GCNT2Q8N0V5 402 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 TMEM230Q96A57 120 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 FGF23Q9GZV9 251 aaPredicted RBP12.87□□□□□ -0.35
CBX3-202ENST00000396386 DLL3Q9NYJ7 618 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 ZNF581Q9P0T4 197 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 UBQLN2Q9UHD9 624 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 ANXA10Q9UJ72 324 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 IGKV1D-8A0A087WSZ0 117 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 TRAV14DV4A0A0A6YYC5 116 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 ANKRD30BLA7E2S9 258 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 J3QW42 95 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 MSTNO14793 375 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 NOS1APO75052 506 aaPredicted RBP12.87□□□□□ -0.35
CBX3-202ENST00000396386 GPM6AP51674 278 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 UBE2NP61088 152 aaKnown RBP12.87□□□□□ -0.35
CBX3-202ENST00000396386 GUSBP1Q15486 140 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 FAM214BQ7L5A3 538 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 ZNF75AQ96N20 296 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 COMMD9Q9P000 198 aa12.87□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A10PA6NDY2 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A18PA6NE21 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A16PA6NEW6 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A20PA6NIJ5 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A8PA6NJQ4 464 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms