RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 LYPD8Q6UX82 237 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 C20orf196Q8IYI0 205 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM123Q8N131 208 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 RPEQ96AT9 228 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ADTRPQ96IZ2 230 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 PTPRFP10586 1907 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 RER1O15258 196 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 CTAG2O75638 210 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 NDUFB6O95139 128 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 PTHLHP12272 177 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 PTTG1IPP53801 180 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 MIDNQ504T8 468 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 WDR38Q5JTN6 314 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 PRSS36Q5K4E3 855 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 LRRTM1Q86UE6 522 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 OR4F17Q8NGA8 305 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 OR1L4Q8NGR5 311 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 MTFP1Q9UDX5 166 aa4.87□□□□□ -1.63
VPS13C-204ENST00000395898 TMEFF2Q9UIK5 374 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-204ENST00000395898 ORM1P02763 201 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 AKR1C3P42330 323 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 CRYBB2P43320 205 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 GZMKP49863 264 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 PCBP3P57721 371 aaKnown RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 TIPARPQ7Z3E1 657 aaKnown RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 FBXO17Q96EF6 278 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 GPR137Q96N19 417 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 MYLKQ15746 1914 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 C3orf85A0A1B0GTC6 90 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 A0A1W2PQD3 144 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 CA6P23280 308 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 IL13RA2Q14627 380 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 ALKBH6Q3KRA9 238 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM65Q6PI78 240 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 Q6ZS52 159 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 RXFP4Q8TDU9 374 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 ARHGAP5-AS1Q96IT6 56 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 MAP6Q96JE9 813 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 SF3B5Q9BWJ5 86 aaKnown RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 RHOFQ9HBH0 211 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 AMDHD2Q9Y303 409 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 CACNA1DQ01668 2161 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 FER1L5A0AVI2 2057 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 SOX15O60248 233 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 CTSVO60911 334 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF32P17041 273 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 TRIP6Q15654 476 aaKnown RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 SPICQ8N5J4 248 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 VSTM2AQ8TAG5 236 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 CHAC2Q8WUX2 184 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 TM4SF19Q96DZ7 209 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 LRFN3Q9BTN0 628 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 C9orf170A2RU37 121 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 CD82P27701 267 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 TNFAIP6P98066 277 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 FFAR4Q5NUL3 377 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 OR52B4Q8NGK2 314 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 MARVELD1Q9BSK0 173 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 FAAP24Q9BTP7 215 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 OCEL1Q9H607 264 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 ICAM5Q9UMF0 924 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 TRAV38-1A0A0B4J264 116 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 OOEPA6NGQ2 149 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 PPIHO43447 177 aaKnown RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 CDC14BO60729 498 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 HSBP1O75506 76 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF83P51522 516 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 WNT3P56703 355 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 FABP9Q0Z7S8 132 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 PRDX4Q13162 271 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 C9orf50Q5SZB4 431 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 OR1L3Q8NH93 324 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 ARSGQ96EG1 525 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 CXXC4Q9H2H0 198 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF385DQ9H6B1 395 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 RCL1Q9Y2P8 373 aaKnown RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 TMEM272A0A1B0GTI8 110 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 A0A1B0GTL3 188 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 H3BP45 60 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 PRKNO60260 465 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 SFTPCP11686 197 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 PNLIPP16233 465 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 FOXC1Q12948 553 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 FZD5Q13467 585 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 FAHD2BQ6P2I3 314 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF683Q8IZ20 524 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 LYG1Q8N1E2 194 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 OR2M7Q8NG81 312 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 FAHD2AQ96GK7 314 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF275Q9NSD4 429 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 ERRFI1Q9UJM3 462 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 SLC45A2Q9UMX9 530 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 MS4A18H0YCH9 400 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 LANCL1O43813 399 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 TMIGD3P0DMS9 266 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-204ENST00000395898 FCER1GP30273 86 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 AMTP48728 403 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 MS4A18Q3C1V0 323 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 GABRG3Q99928 467 aa4.86□□□□□ -1.63
VPS13C-204ENST00000395898 PDCD6O75340 191 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms