RNA–Protein interactions for RNA: ENST00000394943.7

LIMA1-202, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-202ENST00000394943 MOB3CQ70IA8 216 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 ZNF554Q86TJ5 538 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 OR52N4Q8NGI2 321 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 OR51A2Q8NGJ7 313 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 NRGNQ92686 78 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 Q96M66 194 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 DYNLRB1Q9NP97 96 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 GPR173Q9NS66 373 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 CCDC59Q9P031 241 aaKnown RBP5.85□□□□□ -1.47
LIMA1-202ENST00000394943 DUSP13Q9UII6 198 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 IGHV4-30-2A0A087WSY4 118 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 LRRC30A6NM36 301 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 H3BUI4 141 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 ECDO95905 644 aaPredicted RBP5.85□□□□□ -1.47
LIMA1-202ENST00000394943 DVL1P1P54792 670 aaPredicted RBP5.85□□□□□ -1.47
LIMA1-202ENST00000394943 Q3ZCU0 254 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 Q5PR19 223 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 RNF144BQ7Z419 303 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 FAM168AQ92567 244 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 SLC25A46Q96AG3 418 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 RNF170Q96K19 258 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 CEP19Q96LK0 163 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 FUNDC2Q9BWH2 189 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 SHARPINQ9H0F6 387 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 DECR2Q9NUI1 292 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 PPP1R3CQ9UQK1 317 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 ETV7Q9Y603 341 aa5.85□□□□□ -1.47
LIMA1-202ENST00000394943 A0A087X0M5 115 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 TRAV38-1A0A0B4J264 116 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 A0A1B0GX30 115 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 A6NHS1 94 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 J3QLI3 93 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 SPRY3O43610 288 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 CD5LO43866 347 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 NDUFS7O75251 213 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 GADD45AP24522 165 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 GPM6AP51674 278 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 P2RY14Q15391 338 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 HFEQ30201 348 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 GPR107Q5VW38 600 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 CEACAM19Q7Z692 300 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 C8orf31Q8N9H6 132 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 PIGCQ92535 297 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 ABCG5Q9H222 651 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 CNTD2Q9H8S5 307 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 OPN4Q9UHM6 478 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 NOTOA8MTQ0 251 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 IGHV4-31P0DP07 118 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 CD36P16671 472 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 ATP5J2P56134 94 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 VHLLQ6RSH7 139 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 OTOGQ6ZRI0 2925 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 SPICQ8N5J4 248 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 OR10AD1Q8NGE0 317 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 OR10A7Q8NGE5 316 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 RAB1CQ92928 201 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 SOSTQ9BQB4 213 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 TMEM246Q9BRR3 403 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 ZNF665Q9H7R5 613 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 PCDHB16Q9NRJ7 776 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 C1orf123Q9NWV4 160 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 NDUFA13Q9P0J0 144 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 LPAR3Q9UBY5 353 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 STEAP1Q9UHE8 339 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 PPIAL4AQ9Y536 164 aa5.84□□□□□ -1.47
LIMA1-202ENST00000394943 IFITM5A6NNB3 132 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 SYNGR1O43759 233 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 RHBDL1O75783 438 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 MELTFP08582 738 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 PAX8Q06710 450 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 TMEM30BQ3MIR4 351 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 PRAMEF6Q5VXH4 476 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 CLEC2AQ6UVW9 174 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 MOGAT3Q86VF5 341 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 CD177Q8N6Q3 437 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 ZNF525Q8N782 197 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 ZFP41Q8N8Y5 198 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 RAB2BQ8WUD1 216 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 RPL3LQ92901 407 aaKnown RBP5.84□□□□□ -1.48
LIMA1-202ENST00000394943 BORCS8Q96FH0 119 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 REG4Q9BYZ8 158 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 NLKQ9UBE8 527 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 CTSZQ9UBR2 303 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 CKLFQ9UBR5 152 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 SPTA1P02549 2419 aa5.84□□□□□ -1.48
LIMA1-202ENST00000394943 HEATR1Q9H583 2144 aaKnown RBP5.83□□□□□ -1.48
LIMA1-202ENST00000394943 CSMD2Q7Z408 3487 aa5.83□□□□□ -1.48
LIMA1-202ENST00000394943 A0A075B6Q4 140 aa5.83□□□□□ -1.48
LIMA1-202ENST00000394943 TRBV23-1A0A0A0MS06 115 aa5.83□□□□□ -1.48
LIMA1-202ENST00000394943 K7N7A8 449 aa5.83□□□□□ -1.48
LIMA1-202ENST00000394943 CHRM2P08172 466 aa5.83□□□□□ -1.48
LIMA1-202ENST00000394943 PSG2P11465 335 aa5.83□□□□□ -1.48
LIMA1-202ENST00000394943 ZNF93P35789 620 aaPredicted RBP5.83□□□□□ -1.48
LIMA1-202ENST00000394943 RBM11P57052 281 aaKnown RBP5.83□□□□□ -1.48
LIMA1-202ENST00000394943 RPS27AP62979 156 aaKnown RBP5.83□□□□□ -1.48
LIMA1-202ENST00000394943 MEF2CQ06413 473 aaPredicted RBP5.83□□□□□ -1.48
LIMA1-202ENST00000394943 UNC119Q13432 240 aa5.83□□□□□ -1.48
LIMA1-202ENST00000394943 INSL4Q14641 139 aa5.83□□□□□ -1.48
LIMA1-202ENST00000394943 GLT8D1Q68CQ7 371 aa5.83□□□□□ -1.48
LIMA1-202ENST00000394943 OR4D6Q8NGJ1 314 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms