RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MAGIXQ9H6Y5 334 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 ZNF446Q9NWS9 450 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 ACTR3BQ9P1U1 418 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 ENPP5Q9UJA9 477 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 POLDIP2Q9Y2S7 368 aa12.31□□□□□ -0.44
CHMP3-202ENST00000393773 TMEM269A0A1B0GVZ9 245 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 FAM90A22PA8MWA6 464 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 DHRS3O75911 302 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 NRASP01111 189 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 PF4P02776 101 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 ERVK11-1P61568 191 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 ZNF684Q5T5D7 378 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 ZNF573Q86YE8 665 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 DEFB107AQ8IZN7 70 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 WWC2-AS2Q96NR7 200 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 ELAC2Q9BQ52 826 aaKnown RBP12.3□□□□□ -0.44
CHMP3-202ENST00000393773 NUFIP1Q9UHK0 495 aaKnown RBP12.3□□□□□ -0.44
CHMP3-202ENST00000393773 LAMP5Q9UJQ1 280 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 HILPDAQ9Y5L2 63 aa12.3□□□□□ -0.44
CHMP3-202ENST00000393773 ARRDC5A6NEK1 342 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 PSMD9O00233 223 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 DUS4LO95620 317 aaKnown RBP12.29□□□□□ -0.44
CHMP3-202ENST00000393773 TTRP02766 147 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 HCCSP53701 268 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 OR12D2P58182 307 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 COL10A1Q03692 680 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 DYNC1I2Q13409 638 aaKnown RBP12.29□□□□□ -0.44
CHMP3-202ENST00000393773 SLC35D3Q5M8T2 416 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 MINOS1Q5TGZ0 78 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 LCN1P1Q5VSP4 162 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 DEGS2Q6QHC5 323 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 CCDC121Q6ZUS5 278 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 CPOQ8IVL8 374 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 ASCC1Q8N9N2 400 aaKnown RBP12.29□□□□□ -0.44
CHMP3-202ENST00000393773 MYDGFQ969H8 173 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 ZNF714Q96N38 554 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 FEVQ99581 238 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 B9D2Q9BPU9 175 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 INPP5EQ9NRR6 644 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 GPR173Q9NS66 373 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 ARL8BQ9NVJ2 186 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 SLC22A13Q9Y226 551 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 TSSC4Q9Y5U2 329 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-202ENST00000393773 MINOS1-NBL1R4GNA1 71 aa12.29□□□□□ -0.44
CHMP3-202ENST00000393773 IGHV2-26A0A0B4J1V2 119 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 SRSF10O75494 262 aaKnown RBP12.28□□□□□ -0.44
CHMP3-202ENST00000393773 HOXD3P31249 432 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-202ENST00000393773 ACTA2P62736 377 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 ACTG2P63267 376 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 ACTC1P68032 377 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 ACTA1P68133 377 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 ROM1Q03395 351 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 SLC34A1Q06495 639 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 GINS1Q14691 196 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 CLVS2Q5SYC1 327 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 KCTD18Q6PI47 426 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-202ENST00000393773 C10orf99Q6UWK7 81 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 C16orf89Q6UX73 402 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 OR8H2Q8N162 312 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 LINC00482Q8N8I6 264 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 TTTY10Q9BZA0 68 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 YIPF3Q9GZM5 350 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 COPS3Q9UNS2 423 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 KIAA2026Q5HYC2 2103 aa12.28□□□□□ -0.44
CHMP3-202ENST00000393773 TCRBV4S1A1TA0A5B7 111 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 F8VVB4 439 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 F8VWA3 439 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 DLGAP1O14490 977 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 GSC2O15499 205 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 SNX3O60493 162 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 EDDM3BP56851 147 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 RPS7P62081 194 aaKnown RBP12.27□□□□□ -0.45
CHMP3-202ENST00000393773 CD69Q07108 199 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 IL24Q13007 206 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 GK3PQ14409 553 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 ZNF829Q3KNS6 432 aaPredicted RBP12.27□□□□□ -0.45
CHMP3-202ENST00000393773 DEFB121Q5J5C9 76 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 ETV3LQ6ZN32 361 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 ASRGL1Q7L266 308 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 C16orf82Q7Z2V1 217 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 OR4P4Q8NGL7 312 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 GIPC3Q8TF64 312 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 MROQ9BYG7 248 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 PKIBQ9C010 78 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 TAGLN3Q9UI15 199 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 SESN1Q9Y6P5 492 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 V9GYS6 101 aa12.27□□□□□ -0.45
CHMP3-202ENST00000393773 TMEM82A0PJX8 343 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 CCDC182A6NF36 153 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 MRPL3P09001 348 aaKnown RBP12.26□□□□□ -0.45
CHMP3-202ENST00000393773 CDK5Q00535 292 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 MEF2CQ06413 473 aaPredicted RBP12.26□□□□□ -0.45
CHMP3-202ENST00000393773 APOFQ13790 326 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 Q6ZSR3 168 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 GDPD3Q7L5L3 318 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 TMEM179BQ7Z7N9 219 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 ZNF679Q8IYX0 411 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 NDNFQ8TB73 568 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 MOB1AQ9H8S9 216 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 LIN7BQ9HAP6 207 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms