RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 DNPH1O43598 174 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 RAMP1O60894 148 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 TMEM225BP0DP42 221 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 SRFP11831 508 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 ZNF44P15621 663 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 GABRR1P24046 479 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 CHATP28329 748 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 SFTPDP35247 375 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 PPT1P50897 306 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 MTCP1P56278 107 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 RAB35Q15286 201 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 RSU1Q15404 277 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 RSPO1Q2MKA7 263 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-203ENST00000393211 MIDNQ504T8 468 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 AWAT1Q58HT5 328 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 FAM27BQ5VT28 67 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 LHFPL2Q6ZUX7 228 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 C1QL4Q86Z23 238 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 FAM185AQ8N0U4 392 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 TMEM123Q8N131 208 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 ZFP82Q8N141 532 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 RTN4IP1Q8WWV3 396 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-203ENST00000393211 RASL10BQ96S79 203 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 CRB3Q9BUF7 120 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 DEFB126Q9BYW3 111 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 SLC35B3Q9H1N7 401 aa8.72□□□□□ -1.01
COL17A1-203ENST00000393211 UNKLQ9H9P5 680 aaKnown RBP8.72□□□□□ -1.01
COL17A1-203ENST00000393211 PTRH2Q9Y3E5 179 aaKnown RBP8.72□□□□□ -1.01
COL17A1-203ENST00000393211 RALGAPA1Q6GYQ0 2036 aa8.71□□□□□ -1.01
COL17A1-203ENST00000393211 OR5H15A6NDH6 313 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 BTBD17A6NE02 478 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 ZNF850A8MQ14 1090 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 UMAD1C9J7I0 102 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 NPIPA2E9PIF3 369 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 NPIPA3F8WFD2 350 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 SCRG1O75711 98 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 CDS2O95674 445 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 RAB5AP20339 215 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 CRYGSP22914 178 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 ZNF385CQ66K41 422 aaPredicted RBP8.71□□□□□ -1.02
COL17A1-203ENST00000393211 ZNF100Q8IYN0 542 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 SLC25A45Q8N413 288 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 LRRC18Q8N456 261 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 NPRL2Q8WTW4 380 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 DNASE2BQ8WZ79 361 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 TCEAL3Q969E4 200 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 PIGTQ969N2 578 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 ERGIC1Q969X5 290 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 SGK3Q96BR1 496 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 MOB3AQ96BX8 217 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 TECTBQ96PL2 329 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 SF3B5Q9BWJ5 86 aaKnown RBP8.71□□□□□ -1.02
COL17A1-203ENST00000393211 BCO1Q9HAY6 547 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 ZNF286AQ9HBT8 521 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 SPACA1Q9HBV2 294 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 PLSCR2Q9NRY7 297 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 AK3Q9UIJ7 227 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 FOXD3Q9UJU5 478 aaPredicted RBP8.71□□□□□ -1.02
COL17A1-203ENST00000393211 RARRES3Q9UL19 164 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 CHCHD2Q9Y6H1 151 aaPredicted RBP8.71□□□□□ -1.02
COL17A1-203ENST00000393211 C5orf42Q9H799 3197 aa8.71□□□□□ -1.02
COL17A1-203ENST00000393211 NSG1A0A0A6YYJ2 146 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 C5orf63A6NC05 138 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 MASP2O00187 686 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 SCGB1D2O95969 90 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 IGHV2-5P01817 119 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 OPN1LWP04000 364 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 CST2P09228 141 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 OR5AC1P0C628 307 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 RBP2P50120 134 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 AFF3P51826 1226 aaKnown RBP8.7□□□□□ -1.02
COL17A1-203ENST00000393211 STARD6P59095 220 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 ZNF616Q08AN1 781 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 ZNF266Q14584 549 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 GNMTQ14749 295 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 TMEM42Q69YG0 159 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 TMEM211Q6ICI0 200 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 FBXW12Q6X9E4 464 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 C20orf196Q8IYI0 205 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 MAML2Q8IZL2 1156 aaPredicted RBP8.7□□□□□ -1.02
COL17A1-203ENST00000393211 TCTEX1D2Q8WW35 142 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 HPSE2Q8WWQ2 592 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 MSI2Q96DH6 328 aaKnown RBP8.7□□□□□ -1.02
COL17A1-203ENST00000393211 MARS2Q96GW9 593 aaKnown RBP8.7□□□□□ -1.02
COL17A1-203ENST00000393211 SPSB2Q99619 263 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 FAAP24Q9BTP7 215 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 RSRP1Q9BUV0 290 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 SMIM3Q9BZL3 60 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 EIF5A2Q9GZV4 153 aaKnown RBP8.7□□□□□ -1.02
COL17A1-203ENST00000393211 WFDC1Q9HC57 220 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 KCNJ16Q9NPI9 418 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 PLEK2Q9NYT0 353 aa8.7□□□□□ -1.02
COL17A1-203ENST00000393211 DUXBA0A1W2PPF3 345 aa8.69□□□□□ -1.02
COL17A1-203ENST00000393211 GJE1A6NN92 205 aa8.69□□□□□ -1.02
COL17A1-203ENST00000393211 M0R036 132 aa8.69□□□□□ -1.02
COL17A1-203ENST00000393211 NME2P1O60361 137 aa8.69□□□□□ -1.02
COL17A1-203ENST00000393211 SNRNP70P08621 437 aaKnown RBP8.69□□□□□ -1.02
COL17A1-203ENST00000393211 CD63P08962 238 aa8.69□□□□□ -1.02
COL17A1-203ENST00000393211 MMP9P14780 707 aa8.69□□□□□ -1.02
COL17A1-203ENST00000393211 ZNF14P17017 642 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms