RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 HTR3BO95264 441 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 NPBWR2P48146 333 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 B2MP61769 119 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 HOXA4Q00056 320 aaPredicted RBP12.87□□□□□ -0.35
MKS1-202ENST00000393119 C22orf34Q6ZV56 151 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 MRPL21Q7Z2W9 205 aaKnown RBP12.87□□□□□ -0.35
MKS1-202ENST00000393119 FTMTQ8N4E7 242 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 OR2T35Q8NGX2 323 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 HPSE2Q8WWQ2 592 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 DYRK2Q92630 601 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 ACTR6Q9GZN1 396 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 C20orf85Q9H1P6 137 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 PIPOXQ9P0Z9 390 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 FZR1Q9UM11 496 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 KRBOX1C9JBD0 128 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 XRCC2O43543 280 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 FGF2P09038 288 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 CXCL2P19875 107 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 PTGER4P35408 488 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 RAD52P43351 418 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 GPM6AP51674 278 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 UBE2NP61088 152 aaKnown RBP12.87□□□□□ -0.35
MKS1-202ENST00000393119 TAF9Q16594 264 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 PIGYQ3MUY2 71 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 ZNF474Q6S9Z5 364 aaPredicted RBP12.87□□□□□ -0.35
MKS1-202ENST00000393119 PNLDC1Q8NA58 520 aaKnown RBP12.87□□□□□ -0.35
MKS1-202ENST00000393119 KCNG3Q8TAE7 436 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 APOBEC3DQ96AK3 386 aaPredicted RBP12.87□□□□□ -0.35
MKS1-202ENST00000393119 HDHD3Q9BSH5 251 aaPredicted RBP12.87□□□□□ -0.35
MKS1-202ENST00000393119 GLRX2Q9NS18 164 aa12.87□□□□□ -0.35
MKS1-202ENST00000393119 ZNF816-ZNF321PA0A0X1KG74 233 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 SELEP16581 610 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 RBP2P50120 134 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 PRDX4Q13162 271 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 FAM180AQ6UWF9 173 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 C6orf201Q7Z4U5 140 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 OR6K3Q8NGY3 331 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 PTX4Q96A99 478 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 SNRNP40Q96DI7 357 aaKnown RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 RAB3CQ96E17 227 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 TMPRSS13Q9BYE2 586 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 OR2J1Q9GZK6 312 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 CHST6Q9GZX3 395 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 PLSCR4Q9NRQ2 329 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 ASF1BQ9NVP2 202 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 IL36RNQ9UBH0 155 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 OR14I1A6ND48 311 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 MBD3L4A6NDZ8 208 aaPredicted RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 MBD3L3A6NE82 208 aaPredicted RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 MBD3L5A6NJ08 208 aaPredicted RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 C1QTNF9BB2RNN3 333 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 H3BUI4 141 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 WDR1O75083 606 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 B3GALNT1O75752 331 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 ECDO95905 644 aaPredicted RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 LPLP06858 475 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 C1QTNF9P0C862 333 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 RPS27AP62979 156 aaKnown RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 MRPS10P82664 201 aaKnown RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 NKAPLQ5M9Q1 402 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 ZNF324BQ6AW86 544 aaPredicted RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 EIF4E3Q8N5X7 224 aaKnown RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 OR52B4Q8NGK2 314 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 MBD3L2Q8NHZ7 208 aaPredicted RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 DACT3Q96B18 629 aaPredicted RBP12.86□□□□□ -0.35
MKS1-202ENST00000393119 SEC22CQ9BRL7 303 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 PROCRQ9UNN8 238 aa12.86□□□□□ -0.35
MKS1-202ENST00000393119 PYCARD-AS1I3L0S3 204 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 MSTNO14793 375 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 RRP8O43159 456 aaKnown RBP12.85□□□□□ -0.35
MKS1-202ENST00000393119 PSMB1P20618 241 aaKnown RBP12.85□□□□□ -0.35
MKS1-202ENST00000393119 BLVRBP30043 206 aaPredicted RBP12.85□□□□□ -0.35
MKS1-202ENST00000393119 STEAP1BQ6NZ63 245 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 CXorf58Q96LI9 332 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 ZNF488Q96MN9 340 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 S100A13Q99584 98 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 MS4A7Q9GZW8 240 aaPredicted RBP12.85□□□□□ -0.35
MKS1-202ENST00000393119 RGCCQ9H4X1 137 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 IFT46Q9NQC8 304 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 CD300LBA8K4G0 201 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 PEX14O75381 377 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 COX5BP10606 129 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 CA6P23280 308 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 TDGF1P3P51864 188 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 UBE2MP61081 183 aaKnown RBP12.85□□□□□ -0.35
MKS1-202ENST00000393119 SLC25A26Q70HW3 274 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 SPICQ8N5J4 248 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 ZGRF1Q86YA3 2104 aa12.85□□□□□ -0.35
MKS1-202ENST00000393119 PIEZO1Q92508 2521 aa12.84□□□□□ -0.35
MKS1-202ENST00000393119 GEMIN2O14893 280 aaKnown RBP12.84□□□□□ -0.35
MKS1-202ENST00000393119 CRYABP02511 175 aaKnown RBP12.84□□□□□ -0.35
MKS1-202ENST00000393119 HIST1H1DP16402 221 aaKnown RBP12.84□□□□□ -0.35
MKS1-202ENST00000393119 TGFBR3Q03167 851 aa12.84□□□□□ -0.35
MKS1-202ENST00000393119 MALLQ13021 153 aa12.84□□□□□ -0.35
MKS1-202ENST00000393119 RSU1Q15404 277 aa12.84□□□□□ -0.35
MKS1-202ENST00000393119 CNN3Q15417 329 aaKnown RBP12.84□□□□□ -0.35
MKS1-202ENST00000393119 C1orf185Q5T7R7 199 aa12.84□□□□□ -0.35
MKS1-202ENST00000393119 RPUSD3Q6P087 351 aaKnown RBP12.84□□□□□ -0.35
MKS1-202ENST00000393119 C17orf107Q6ZR85 190 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms