RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 RPS23P62266 143 aaKnown RBP16.66■□□□□ 0.26
CCDC50-202ENST00000392456 UBE2V2Q15819 145 aa16.66■□□□□ 0.26
CCDC50-202ENST00000392456 RAET1LQ5VY80 246 aa16.66■□□□□ 0.26
CCDC50-202ENST00000392456 OTPQ5XKR4 325 aa16.66■□□□□ 0.26
CCDC50-202ENST00000392456 MRPL52Q86TS9 123 aaKnown RBP16.66■□□□□ 0.26
CCDC50-202ENST00000392456 LGALS14Q8TCE9 139 aa16.66■□□□□ 0.26
CCDC50-202ENST00000392456 ALKBH3Q96Q83 286 aaPredicted RBP16.66■□□□□ 0.26
CCDC50-202ENST00000392456 SLC25A31Q9H0C2 315 aa16.66■□□□□ 0.26
CCDC50-202ENST00000392456 ATG5Q9H1Y0 275 aa16.66■□□□□ 0.26
CCDC50-202ENST00000392456 SRA1Q9HD15 236 aaKnown RBP16.66■□□□□ 0.26
CCDC50-202ENST00000392456 SLC22A31A6NKX4 558 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 RAMP1O60894 148 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 TBPP20226 339 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 GABRR1P24046 479 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 PTH2RP49190 550 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 ERVFC1-1P60608 527 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 ABLIM2Q6H8Q1 611 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 OR5M8Q8NGP6 311 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 RGP1Q92546 391 aaPredicted RBP16.65■□□□□ 0.26
CCDC50-202ENST00000392456 ZBTB8AQ96BR9 441 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 RRNAD1Q96FB5 475 aaKnown RBP16.65■□□□□ 0.26
CCDC50-202ENST00000392456 POTEKPQ9BYX7 375 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 TTTY10Q9BZA0 68 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 CDV3Q9UKY7 258 aaKnown RBP16.65■□□□□ 0.26
CCDC50-202ENST00000392456 CACNA1CQ13936 2221 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 GPANK1O95872 356 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 OR1C1Q15619 314 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 ZNF674Q2M3X9 581 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 LRRC37A5PQ49AS3 106 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 H1FNTQ75WM6 255 aaPredicted RBP16.65■□□□□ 0.26
CCDC50-202ENST00000392456 ACBD7Q8N6N7 88 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 EXD3Q8N9H8 876 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 STEAP2Q8NFT2 490 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 OR10H4Q8NGA5 316 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 TRIM36Q9NQ86 728 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 SERINC1Q9NRX5 453 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 DKKL1Q9UK85 242 aa16.65■□□□□ 0.26
CCDC50-202ENST00000392456 OR6A2O95222 327 aa16.64■□□□□ 0.26
CCDC50-202ENST00000392456 OR2C1O95371 312 aa16.64■□□□□ 0.26
CCDC50-202ENST00000392456 NAA10P41227 235 aaPredicted RBP16.64■□□□□ 0.26
CCDC50-202ENST00000392456 TLE3Q04726 772 aa16.64■□□□□ 0.26
CCDC50-202ENST00000392456 RTP5Q14D33 572 aa16.64■□□□□ 0.26
CCDC50-202ENST00000392456 LINC01590Q5TEZ4 76 aa16.64■□□□□ 0.26
CCDC50-202ENST00000392456 OR52N4Q8NGI2 321 aa16.64■□□□□ 0.26
CCDC50-202ENST00000392456 OR6K6Q8NGW6 343 aa16.64■□□□□ 0.26
CCDC50-202ENST00000392456 SMPDL3BQ92485 455 aa16.64■□□□□ 0.26
CCDC50-202ENST00000392456 EXTL1Q92935 676 aa16.64■□□□□ 0.26
CCDC50-202ENST00000392456 DNAJC4Q9NNZ3 241 aa16.64■□□□□ 0.26
CCDC50-202ENST00000392456 XRCC3O43542 346 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 B3GALT5-AS1P59052 145 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 HAGHQ16775 308 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 RSPO4Q2I0M5 234 aaPredicted RBP16.64■□□□□ 0.25
CCDC50-202ENST00000392456 ARL9Q6T311 187 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 BTNL8Q6UX41 500 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 INO80EQ8NBZ0 244 aaPredicted RBP16.64■□□□□ 0.25
CCDC50-202ENST00000392456 FOXN4Q96NZ1 517 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 FAAP24Q9BTP7 215 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 CYTL1Q9NRR1 136 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 GPR173Q9NS66 373 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 MED29Q9NX70 200 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 ACACAQ13085 2346 aa16.64■□□□□ 0.25
CCDC50-202ENST00000392456 A0A087WZY1 265 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 TMEM235A6NFC5 223 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 K7EP13 123 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 ACVR1BP36896 505 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 WNT5AP41221 380 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 ATP1B3P54709 279 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 LEMD1Q68G75 181 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 GCNT2Q8N0V5 402 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 OR6N1Q8NGY5 312 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 ABHD4Q8TB40 342 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 ZNF2Q9BSG1 426 aaPredicted RBP16.63■□□□□ 0.25
CCDC50-202ENST00000392456 CHST6Q9GZX3 395 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 C1orf198Q9H425 327 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 CHST11Q9NPF2 352 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 B3GAT1Q9P2W7 334 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 GNG8Q9UK08 70 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 KLK13Q9UKR3 277 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 ZNF407Q9C0G0 2248 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 AGPAT2O15120 278 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 PLPP2O43688 288 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 GFRA3O60609 400 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 LPAR6P43657 344 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 RPL27P61353 136 aaKnown RBP16.63■□□□□ 0.25
CCDC50-202ENST00000392456 HERPUD1Q15011 391 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 MOGAT2Q3SYC2 334 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 TMPPEQ6ZT21 453 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 ZNF519Q8TB69 540 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 TXNIPQ9H3M7 391 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 HAO2Q9NYQ3 351 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 CSAG2Q9Y5P2 127 aa16.63■□□□□ 0.25
CCDC50-202ENST00000392456 PPBPP02775 128 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 IDH3GP51553 393 aaPredicted RBP16.62■□□□□ 0.25
CCDC50-202ENST00000392456 SULF2Q8IWU5 870 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 PPP1R1CQ8WVI7 109 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 EMC6Q9BV81 110 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 ANKRD11Q6UB99 2663 aaPredicted RBP16.62■□□□□ 0.25
CCDC50-202ENST00000392456 DNAJC13O75165 2243 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 TRAPPC6AO75865 159 aa16.62■□□□□ 0.25
CCDC50-202ENST00000392456 RAP1BP61224 184 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms