RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 HOXC11O43248 304 aaPredicted RBP13.26□□□□□ -0.29
CCDC50-201ENST00000392455 DHRS3O75911 302 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 TYMSP04818 313 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 RPS19BP1Q86WX3 136 aaKnown RBP13.26□□□□□ -0.29
CCDC50-201ENST00000392455 OR4S2Q8NH73 311 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 DERL3Q96Q80 235 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 CDX2Q99626 313 aaPredicted RBP13.26□□□□□ -0.29
CCDC50-201ENST00000392455 C20orf27Q9GZN8 174 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 MAP1LC3B2A6NCE7 125 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 ZNF749O43361 778 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 ACAA1P09110 424 aaPredicted RBP13.26□□□□□ -0.29
CCDC50-201ENST00000392455 TNFSF10P50591 281 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 PWWP2BQ6NUJ5 590 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 MAP1LC3BQ9GZQ8 125 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 CEP290O15078 2479 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 LNP1A1A4G5 178 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 FUT3P21217 361 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 TMEM211Q6ICI0 200 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 RFLNAQ6ZTI6 216 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 VN1R2Q8NFZ6 395 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 SNRNP40Q96DI7 357 aaKnown RBP13.26□□□□□ -0.29
CCDC50-201ENST00000392455 KIR3DX1Q9H7L2 352 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 BTAF1O14981 1849 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 hADV38S2A0JD32 116 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 SIRPB1O00241 398 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 TNFRSF10CO14798 259 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 BHLHE23Q8NDY6 225 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 OR2A5Q96R48 311 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 TRIOBPQ9H2D6 2365 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 NQO2P16083 231 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 UBTD1Q9HAC8 227 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 QDPRP09417 244 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 ARRB2P32121 409 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 MEOX2P50222 304 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 SLC38A11Q08AI6 406 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 AANATQ16613 207 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 LILRA2Q8N149 483 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 OR10G8Q8NGN5 311 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 OR1N1Q8NGS0 311 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 DYNLRB2Q8TF09 96 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 CHST2Q9Y4C5 530 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 EMP1P54849 157 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 HYAL1Q12794 435 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 ZNF750Q32MQ0 723 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 ZBTB44Q8NCP5 570 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 RASL12Q9NYN1 266 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 DOK5Q9P104 306 aa13.26□□□□□ -0.29
CCDC50-201ENST00000392455 HAAOP46952 286 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 DUSP8Q13202 625 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 SYT14P1Q58G82 188 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 PARP12Q9H0J9 701 aaKnown RBP13.25□□□□□ -0.29
CCDC50-201ENST00000392455 M0R1B8 84 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 TM4SF4P48230 202 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 PMCHL1Q16048 86 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 FAM169BQ8N8A8 192 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 OR4D9Q8NGE8 314 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 ADAT3Q96EY9 351 aaPredicted RBP13.25□□□□□ -0.29
CCDC50-201ENST00000392455 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 ZDBF2Q9HCK1 2354 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 GPANK1O95872 356 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 RACK1P63244 317 aaKnown RBP13.25□□□□□ -0.29
CCDC50-201ENST00000392455 FAHD2BQ6P2I3 314 aaPredicted RBP13.25□□□□□ -0.29
CCDC50-201ENST00000392455 BATF2Q8N1L9 274 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 FAHD2AQ96GK7 314 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 MS4A8Q9BY19 250 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 SELENOFO60613 162 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 CD1BP29016 333 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 GMPPAQ96IJ6 420 aaPredicted RBP13.25□□□□□ -0.29
CCDC50-201ENST00000392455 GLIPR2Q9H4G4 154 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 ADAMTS5Q9UNA0 930 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 HS3ST2Q9Y278 367 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 A0A087WV62 115 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 KMT5CQ86Y97 462 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 CELF2-AS1Q8N7Q2 184 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 ZNF576Q9H609 170 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 CCR2P41597 374 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 EVX1P49640 407 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 HLA-DRB5Q30154 266 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 PFN4Q8NHR9 129 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 ZNF519Q8TB69 540 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 C1QTNF6Q9BXI9 259 aa13.25□□□□□ -0.29
CCDC50-201ENST00000392455 GAGE10A6NGK3 116 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 IGHV3-9P01782 118 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 RD3LP0DJH9 198 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 COL8A1P27658 744 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 TM4SF18Q96CE8 201 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 DUSP21Q9H596 190 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 PNLIPRP2P54317 469 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 SMIM4Q8WVI0 70 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 PKIBQ9C010 78 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 WDR13Q9H1Z4 485 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 K7ESF4 209 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 ADAM20O43506 726 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 TSPAN12O95859 305 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 KLRB1Q12918 225 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 FNDC7Q5VTL7 733 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 Q6ZNX1 250 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 MASP2O00187 686 aa13.24□□□□□ -0.29
CCDC50-201ENST00000392455 SDCBPO00560 298 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms