RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ANAPC2Q9UJX6 822 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC13A4Q9UKG4 626 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 CFAP45Q9UL16 551 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 NOL7Q9UMY1 257 aaKnown RBP-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 GTF2A1LQ9UNN4 478 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 HHLA3Q9XRX5 114 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 BTRCQ9Y297 605 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 TTLL3Q9Y4R7 772 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM215AQ9Y5M1 114 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM169AQ9Y6X4 670 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 URGCP-MRPS24S4R325 110 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 THADAQ6YHU6 1953 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 IQSEC2Q5JU85 1478 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 ABCB11O95342 1321 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 MAP3K19Q56UN5 1328 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 NBEAQ8NFP9 2946 aa-0.69□□□□□ -2.52
TRAJ28-201ENST00000390509 CCDC7Q96M83 1385 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ADAMTSL1Q8N6G6 1762 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 OTOFQ9HC10 1997 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 KIAA1671Q9BY89 1806 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 IGLV3-32A0A0A0MS00 114 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 LOC389332A0A1B0GUA5 103 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 PGPA6NDG6 321 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 NCBP2LA6PVI3 153 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ZNF727A8MUV8 499 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM86B1E9PN63 330 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 GOLGA6L19H0YKK7 550 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 K7EPK0 472 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 KCNK1O00180 336 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 FAAHO00519 579 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 PIRO00625 290 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 PLPP1O14494 284 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 UBFD1O14562 309 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC9A3R1O14745 358 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 NDC80O14777 642 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 POLR3GO15318 223 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 RS1O15537 224 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CYB5BO43169 146 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CREB3O43889 395 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 RAD1O60671 282 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 KERAO60938 352 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 PEX11AO75192 247 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 EIF3GO75821 320 aaKnown RBP eCLIP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CLPXO76031 633 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 NDUFA7O95182 113 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SYNGR4O95473 234 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 OXSR1O95747 527 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 LY6G6CO95867 125 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SOD1P00441 154 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 RLN2P04090 185 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 FGF1P05230 155 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CRYGDP07320 174 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CCDC175P0C221 793 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM86B2P0C5J1 330 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 OR4A8P0C604 315 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 GSTT2P0CG29 244 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 GSTT2BP0CG30 244 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 C8orf89P0DMQ9 161 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 EPB41P11171 864 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 GTF2F2P13984 249 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 GLRA2P23416 452 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CNTFP26441 200 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 HTR1DP28221 377 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SRIP30626 198 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CHI3L1P36222 383 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 POLR2IP36954 125 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 DDOSTP39656 456 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CD79BP40259 229 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 MAP3K8P41279 467 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 GPR1P46091 355 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 RPL37P61927 97 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 RPS14P62263 151 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CNBPP62633 177 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC35A2P78381 396 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SETQ01105 290 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ART3Q13508 389 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 BTG3Q14201 252 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 RCAN2Q14206 197 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 NCF4Q15080 339 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 PDK2Q15119 407 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 OR8G1Q15617 311 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 TSTQ16762 297 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ZSWIM7Q19AV6 140 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ATP6AP1LQ52LC2 224 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 HAUS3Q68CZ6 603 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 TRIM40Q6P9F5 258 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SDIM1Q6ZPB5 146 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 DGAT2L6Q6ZPD8 337 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 RBPMS2Q6ZRY4 209 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CENPUQ71F23 418 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SPATA21Q7Z572 469 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ASPGQ86U10 573 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CRLF3Q8IUI8 442 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 TMEM126BQ8IUX1 230 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 PSTKQ8IV42 348 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ANKRD18AQ8IVF6 992 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ITPRIPQ8IWB1 547 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 STHQ8IWL8 128 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 AQP12AQ8IXF9 295 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 PUSL1Q8N0Z8 303 aaKnown RBP-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms