RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 BAGE2Q86Y30 109 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 ARV1Q9H2C2 271 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 YBX2Q9Y2T7 364 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 KIR2DS1A0A191URI9 304 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR5H15A6NDH6 313 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 A8MXE2 369 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 SEC14L6B5MCN3 397 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 CLDN34H7C241 214 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 ADAM20O43506 726 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 FOXS1O43638 330 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 KIR2DS4P43632 304 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 PMP22Q01453 160 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 TFF2Q03403 129 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 KIR2DS1Q14954 304 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 ANKRD55Q3KP44 614 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 HOGA1Q86XE5 327 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR10J5Q8NHC4 309 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 ASB10Q8WXI3 467 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 NOVA1P51513 510 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 SRSF3P84103 164 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 FZD2Q14332 565 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 EIF4E3Q8N5X7 224 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR13D1Q8NGV5 346 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 PATJQ8NI35 1801 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 RNF133Q8WVZ7 376 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 SNX22Q96L94 193 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 ANXA10Q9UJ72 324 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 GPR132Q9UNW8 380 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 B4GALT1P15291 398 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 IL11P20809 199 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 APLNRP35414 380 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 NHLH2Q02577 135 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 YRDCQ86U90 279 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 GPBAR1Q8TDU6 330 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 PTPMT1Q8WUK0 201 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 HIST1H2BAQ96A08 127 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 MVB12AQ96EY5 273 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 TMED3Q9Y3Q3 217 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 DOCK6Q96HP0 2047 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 H3BQ15 152 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 CTSDP07339 412 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 CD200P41217 278 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 B2MP61769 119 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 DLK1P80370 383 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 LY6G6FQ5SQ64 297 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 WDR13Q9H1Z4 485 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 OSGIN2Q9Y236 505 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 GABRG2P18507 467 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 CALCRP30988 508 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 FGF8P55075 233 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 FOXL2P58012 376 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR13G1Q8NGZ3 307 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 UBALD1Q8TB05 177 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 POM121Q96HA1 1249 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 IP6K3Q96PC2 410 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 MENTQ9BUN1 341 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 MMP17Q9ULZ9 603 aa11.62□□□□□ -0.55
TRAPPC9-201ENST00000389328 MDFIC2A0A1B0GVS7 189 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 LINC01565O15544 149 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 DHRS3O75911 302 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 MDKP21741 143 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 FGF7P21781 194 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 FHITP49789 147 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 ALKBH3Q96Q83 286 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 LPAR5Q9H1C0 372 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR51M1Q9H341 326 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 TMEM100Q9NV29 134 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 TP53TG5Q9Y2B4 290 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 HNF1AP20823 631 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 P2RY4P51582 365 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 TMEM267Q0VDI3 215 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 NSUN5P2Q63ZY6 315 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 TMEM18Q96B42 140 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 C5orf66Q9H5L9 145 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 B4GALT7Q9UBV7 327 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 IL13RA2Q14627 380 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 AQP3Q92482 292 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 PTX4Q96A99 478 aa11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 ZNF646O15015 1829 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC9-201ENST00000389328 FSTP19883 344 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 HLA-DRB3P79483 266 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 LHFPL2Q6ZUX7 228 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR10G3Q8NGC4 313 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 DYRK2Q92630 601 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 CTHRC1Q96CG8 243 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR51I2Q9H344 312 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 A0A1W2PPC4 97 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 PQLC2LA1A4F0 135 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 CD74P04233 296 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 PATE4P0C8F1 98 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 SMIM10L1P0DMW3 83 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 HAAOP46952 286 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 RPS16P62249 146 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 ROM1Q03395 351 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 SMIM10Q96HG1 83 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 CALHM2Q9HA72 323 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 PSENENQ9NZ42 101 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 SSR4P51571 173 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 C1orf100Q5SVJ3 147 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 TMEM92Q6UXU6 159 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms