RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 C4orf45Q96LM5 186 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 Q96MT0 163 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 TMEM56Q96MV1 263 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 CSF3RQ99062 836 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 YTHDF1Q9BYJ9 559 aaKnown RBP4.8□□□□□ -1.64
ERCC4-202ENST00000389138 LINC00597Q9H2U6 94 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 POPDC3Q9HBV1 291 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 B3GAT2Q9NPZ5 323 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 CTPS2Q9NRF8 586 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 HRASLS2Q9NWW9 162 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 VPREB3Q9UKI3 123 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 TMEM56-RWDD3S4R434 201 aa4.8□□□□□ -1.64
ERCC4-202ENST00000389138 ZFC3H1O60293 1989 aaKnown RBP4.8□□□□□ -1.64
ERCC4-202ENST00000389138 NME4O00746 187 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 ADAM10O14672 748 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 CDIPTO14735 213 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 PFDN6O15212 129 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 TCAPO15273 167 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 OR8U9P0C7N5 309 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 ATP6V1B2P21281 511 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 GDF1P27539 372 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 RIPPLY1Q0D2K3 151 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 GTF2H2Q13888 395 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 ZNF284Q2VY69 593 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 FAM120AOSQ5T036 256 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 GTF2H2CQ6P1K8 395 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 SBSNQ6UWP8 590 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 LGI3Q8N145 548 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 LRRC18Q8N456 261 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 OR2T12Q8NG77 320 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 OR10C1Q96KK4 312 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 CNBD2Q96M20 576 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 COL21A1Q96P44 957 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 MS4A4EQ96PG1 132 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 SORCS2Q96PQ0 1159 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 OR14A2Q96R54 314 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 CABLES2Q9BTV7 478 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 OSBPL11Q9BXB4 747 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 NXF2Q9GZY0 626 aaKnown RBP4.79□□□□□ -1.64
ERCC4-202ENST00000389138 KRCC1Q9NPI7 259 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-202ENST00000389138 PRODH2Q9UF12 536 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 RIMS3Q9UJD0 308 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 KCNS2Q9ULS6 477 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 NUP214P35658 2090 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-202ENST00000389138 BSNQ9UPA5 3926 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 A0A0A6YYD4 124 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 A0A1B0GTH9 108 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 A0A1B0GV90 55 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 IGLON5A6NGN9 336 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-202ENST00000389138 BET1O15155 118 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 PHF1O43189 567 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-202ENST00000389138 LYPD3O95274 346 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 CYB5R3P00387 301 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-202ENST00000389138 APOC1P02654 83 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 GZMHP20718 246 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 ACRV1P26436 265 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 AP1S2P56377 157 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 CDKL1Q00532 357 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 IL5RAQ01344 420 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 CD300CQ08708 224 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 OR1Q1Q15612 314 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 PAGE3Q5JUK9 113 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 C22orf39Q6P5X5 142 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 ATRAIDQ6UW56 229 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 PCSK4Q6UW60 755 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 ZNF730Q6ZMV8 503 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 ZNF782Q6ZMW2 699 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-202ENST00000389138 CLDN22Q8N7P3 220 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 NEXN-AS1Q8NBZ9 246 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 OR7A2PQ8NGA2 310 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 P2RX4Q99571 388 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 OVOL2Q9BRP0 275 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 CHIAQ9BZP6 476 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 METTL17Q9H7H0 456 aaPredicted RBP4.79□□□□□ -1.64
ERCC4-202ENST00000389138 AKIP1Q9NQ31 210 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 GNPTGQ9UJJ9 305 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 SAMD4AQ9UPU9 718 aaKnown RBP4.79□□□□□ -1.64
ERCC4-202ENST00000389138 PTPRQQ9UMZ3 2332 aa4.79□□□□□ -1.64
ERCC4-202ENST00000389138 TP53BP1Q12888 1972 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 LINC00473A8K010 186 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 FXYD1O00168 92 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 EIF3GO75821 320 aaKnown RBP eCLIP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 KRT75O95678 551 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 MYOD1P15172 320 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 NDUFB7P17568 137 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 LMO1P25800 156 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 IL12AP29459 219 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 FOLR3P41439 243 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 EMDP50402 254 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 GAS1P54826 345 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 DCDC1P59894 354 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 RPL8P62917 257 aaKnown RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 RPL38P63173 70 aaKnown RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 PTGR1Q14914 329 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 HAGHQ16775 308 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 C4orf26Q17RF5 130 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 ATP6AP1LQ52LC2 224 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 OR52E8Q6IFG1 317 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms