RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ERVFRD-1P60508 538 aa21.47■■□□□ 1.03
NPHP3-202ENST00000383282 ESRRGP62508 458 aa21.47■■□□□ 1.03
NPHP3-202ENST00000383282 TMEM200BQ69YZ2 307 aa21.47■■□□□ 1.03
NPHP3-202ENST00000383282 KDM4DQ6B0I6 523 aa21.47■■□□□ 1.03
NPHP3-202ENST00000383282 OR2T27Q8NH04 317 aa21.47■■□□□ 1.03
NPHP3-202ENST00000383282 EME1Q96AY2 570 aa21.47■■□□□ 1.03
NPHP3-202ENST00000383282 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.47■■□□□ 1.03
NPHP3-202ENST00000383282 TET2Q6N021 2002 aaPredicted RBP21.46■■□□□ 1.03
NPHP3-202ENST00000383282 LOC110117498-PIK3R3F6TDL0 507 aa21.46■■□□□ 1.03
NPHP3-202ENST00000383282 SYNGR1O43759 233 aa21.46■■□□□ 1.03
NPHP3-202ENST00000383282 NOS1APO75052 506 aaPredicted RBP21.46■■□□□ 1.03
NPHP3-202ENST00000383282 TTRP02766 147 aa21.46■■□□□ 1.03
NPHP3-202ENST00000383282 COX7A1P24310 79 aa21.46■■□□□ 1.03
NPHP3-202ENST00000383282 MFGE8Q08431 387 aaPredicted RBP21.46■■□□□ 1.03
NPHP3-202ENST00000383282 OR4M1Q8NGD0 313 aa21.46■■□□□ 1.03
NPHP3-202ENST00000383282 PPP1R14AQ96A00 147 aa21.46■■□□□ 1.03
NPHP3-202ENST00000383282 AJUBAQ96IF1 538 aa21.46■■□□□ 1.03
NPHP3-202ENST00000383282 GPR173Q9NS66 373 aa21.46■■□□□ 1.03
NPHP3-202ENST00000383282 H2AFY2Q9P0M6 372 aaPredicted RBP21.46■■□□□ 1.03
NPHP3-202ENST00000383282 PRR32B1ATL7 298 aa21.45■■□□□ 1.02
NPHP3-202ENST00000383282 DLGAP1O14490 977 aa21.45■■□□□ 1.02
NPHP3-202ENST00000383282 EI24O14681 340 aa21.45■■□□□ 1.02
NPHP3-202ENST00000383282 MITFO75030 526 aaPredicted RBP21.45■■□□□ 1.02
NPHP3-202ENST00000383282 BCL2L15Q5TBC7 163 aa21.45■■□□□ 1.02
NPHP3-202ENST00000383282 ZNF322Q6U7Q0 402 aaPredicted RBP21.45■■□□□ 1.02
NPHP3-202ENST00000383282 KLHDC1Q8N7A1 406 aa21.45■■□□□ 1.02
NPHP3-202ENST00000383282 MNTQ99583 582 aa21.45■■□□□ 1.02
NPHP3-202ENST00000383282 OR14J1Q9UGF5 321 aa21.45■■□□□ 1.02
NPHP3-202ENST00000383282 FOXJ3Q9UPW0 622 aa21.45■■□□□ 1.02
NPHP3-202ENST00000383282 CCL3L1P16619 93 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 CEBPDP49716 269 aaPredicted RBP21.44■■□□□ 1.02
NPHP3-202ENST00000383282 BMXP51813 675 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 CXCR4P61073 352 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 TMEM42Q69YG0 159 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 CRIP3Q6Q6R5 217 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 CALHM1Q8IU99 346 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 CBR4Q8N4T8 237 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 C11orf42Q8N5U0 333 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 C11orf44Q8N8P7 122 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 NRIP2Q9BQI9 281 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 R4GMQ9 66 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 V9GYS6 101 aa21.44■■□□□ 1.02
NPHP3-202ENST00000383282 PQLC2LA1A4F0 135 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 OPN1MWP04001 364 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 TK1P04183 234 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 OPN1MW2P0DN77 364 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 OPN1MW3P0DN78 364 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 PAX6P26367 422 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 PTGES3Q15185 160 aaKnown RBP21.43■■□□□ 1.02
NPHP3-202ENST00000383282 ZBTB49Q6ZSB9 765 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 MEPCEQ7L2J0 689 aaKnown RBP21.43■■□□□ 1.02
NPHP3-202ENST00000383282 ELMOD2Q8IZ81 293 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 NKX3-1Q99801 234 aaPredicted RBP21.43■■□□□ 1.02
NPHP3-202ENST00000383282 APOL4Q9BPW4 351 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 RIBC2Q9H4K1 309 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 DCLRE1BQ9H816 532 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 OR52A1Q9UKL2 312 aa21.43■■□□□ 1.02
NPHP3-202ENST00000383282 ZNF670-ZNF695F2Z2N8 137 aa21.42■■□□□ 1.02
NPHP3-202ENST00000383282 PRKYO43930 277 aa21.42■■□□□ 1.02
NPHP3-202ENST00000383282 ALDH3A2P51648 485 aa21.42■■□□□ 1.02
NPHP3-202ENST00000383282 ZNF273Q14593 569 aa21.42■■□□□ 1.02
NPHP3-202ENST00000383282 ZNF782Q6ZMW2 699 aaPredicted RBP21.42■■□□□ 1.02
NPHP3-202ENST00000383282 SLC35F2Q8IXU6 374 aa21.42■■□□□ 1.02
NPHP3-202ENST00000383282 CFHR4Q92496 578 aa21.42■■□□□ 1.02
NPHP3-202ENST00000383282 HES4Q9HCC6 221 aa21.42■■□□□ 1.02
NPHP3-202ENST00000383282 SNX5Q9Y5X3 404 aa21.42■■□□□ 1.02
NPHP3-202ENST00000383282 DHRS7CA6NNS2 312 aa21.41■■□□□ 1.02
NPHP3-202ENST00000383282 RRP9O43818 475 aaKnown RBP21.41■■□□□ 1.02
NPHP3-202ENST00000383282 SRSF10O75494 262 aaKnown RBP21.41■■□□□ 1.02
NPHP3-202ENST00000383282 ALPLP05186 524 aa21.41■■□□□ 1.02
NPHP3-202ENST00000383282 VSIG10L2P0DP72 767 aa21.41■■□□□ 1.02
NPHP3-202ENST00000383282 BATF2Q8N1L9 274 aa21.41■■□□□ 1.02
NPHP3-202ENST00000383282 OR14K1Q8NGZ2 314 aa21.41■■□□□ 1.02
NPHP3-202ENST00000383282 ABCB10Q9NRK6 738 aa21.41■■□□□ 1.02
NPHP3-202ENST00000383282 G3V4G9 280 aa21.4■■□□□ 1.02
NPHP3-202ENST00000383282 PIPP12273 146 aaPredicted RBP21.4■■□□□ 1.02
NPHP3-202ENST00000383282 MPZP25189 248 aa21.4■■□□□ 1.02
NPHP3-202ENST00000383282 NXNL2Q5VZ03 156 aa21.4■■□□□ 1.02
NPHP3-202ENST00000383282 LHFPL4Q7Z7J7 247 aa21.4■■□□□ 1.02
NPHP3-202ENST00000383282 ASCC1Q8N9N2 400 aaKnown RBP21.4■■□□□ 1.02
NPHP3-202ENST00000383282 OR13D1Q8NGV5 346 aa21.4■■□□□ 1.02
NPHP3-202ENST00000383282 FOXRED1Q96CU9 486 aaPredicted RBP21.4■■□□□ 1.02
NPHP3-202ENST00000383282 PKIBQ9C010 78 aa21.4■■□□□ 1.02
NPHP3-202ENST00000383282 CLN6Q9NWW5 311 aa21.4■■□□□ 1.02
NPHP3-202ENST00000383282 SLC7A11Q9UPY5 501 aa21.4■■□□□ 1.02
NPHP3-202ENST00000383282 TBL2Q9Y4P3 447 aaKnown RBP21.4■■□□□ 1.02
NPHP3-202ENST00000383282 VGLL3A8MV65 326 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 CHST1O43916 411 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 ARG1P05089 322 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 IL24Q13007 206 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 PLEKHG7Q6ZR37 379 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 BCDIN3DQ7Z5W3 292 aaKnown RBP21.39■■□□□ 1.01
NPHP3-202ENST00000383282 PIFOQ8TCI5 191 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 CDCA4Q9BXL8 241 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 GABARAPL3Q9BY60 117 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 PLEKHA1Q9HB21 404 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 ADGRL4Q9HBW9 690 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 SLC22A13Q9Y226 551 aa21.39■■□□□ 1.01
NPHP3-202ENST00000383282 A6NIN4 97 aa21.38■■□□□ 1.01
NPHP3-202ENST00000383282 C17orf98A8MV24 154 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms