RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 HTR2CP28335 458 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 CD34P28906 385 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 LUMP51884 338 aaPredicted RBP10.78□□□□□ -0.68
CIITA-202ENST00000381835 RAB1AP62820 205 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 EIF2S3LQ2VIR3 472 aaKnown RBP10.78□□□□□ -0.68
CIITA-202ENST00000381835 GFOD2Q3B7J2 385 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 LRRC37A5PQ49AS3 106 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 SCGB2B2Q4G0G5 96 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 KCNRGQ8N5I3 272 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 ZNF799Q96GE5 643 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 NARS2Q96I59 477 aaKnown RBP10.78□□□□□ -0.68
CIITA-202ENST00000381835 SCPEP1Q9HB40 452 aa10.78□□□□□ -0.68
CIITA-202ENST00000381835 NOP16Q9Y3C1 178 aaKnown RBP10.78□□□□□ -0.68
CIITA-202ENST00000381835 LOC107986453A0A1B0GWG9 222 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 A0A1W2PR80 420 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 OR6C6A6NF89 314 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 ZNF736B4DX44 427 aaPredicted RBP10.77□□□□□ -0.69
CIITA-202ENST00000381835 CYB5AP00167 134 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 TTRP02766 147 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 HOXB1P14653 301 aaPredicted RBP10.77□□□□□ -0.69
CIITA-202ENST00000381835 BMP5P22003 454 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 CTSSP25774 331 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 ARHGDIBP52566 201 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 GLYATL3Q5SZD4 288 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 ATPAF1Q5TC12 328 aaPredicted RBP10.77□□□□□ -0.69
CIITA-202ENST00000381835 FAM166AQ6J272 317 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 C11orf87Q6NUJ2 197 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 COMMD2Q86X83 199 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 BPIFB2Q8N4F0 458 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 CLRN3Q8NCR9 226 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 CPEB3Q8NE35 698 aaKnown RBP10.77□□□□□ -0.69
CIITA-202ENST00000381835 BPIFCQ8NFQ6 507 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 OR8B12Q8NGG6 310 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 OR5M8Q8NGP6 311 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 SLC25A28Q96A46 364 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 VRK1Q99986 396 aaPredicted RBP10.77□□□□□ -0.69
CIITA-202ENST00000381835 ZMAT3Q9HA38 289 aaKnown RBP10.77□□□□□ -0.69
CIITA-202ENST00000381835 DCAF16Q9NXF7 216 aa10.77□□□□□ -0.69
CIITA-202ENST00000381835 TRGV8A0A0C4DH27 118 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 OR2F2O95006 317 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 CSN2P05814 226 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 CD2P06729 351 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 CRYGSP22914 178 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 OTX1P32242 354 aaPredicted RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 ECH1Q13011 328 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 DHRS2Q13268 280 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 OR2F1Q13607 317 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 BEX5Q5H9J7 111 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 ASPHD2Q6ICH7 369 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 ZNF704Q6ZNC4 412 aaPredicted RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 MOB3CQ70IA8 216 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 LILRB2Q8N423 598 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 OR10Z1Q8NGY1 313 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 OR51E1Q8TCB6 317 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 PGAM5Q96HS1 289 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 SEC22AQ96IW7 307 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 SFXN3Q9BWM7 321 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 ZNF471Q9BX82 626 aaPredicted RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 NKX6-2Q9C056 277 aaPredicted RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 WDR13Q9H1Z4 485 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 MOB1AQ9H8S9 216 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 BARX1Q9HBU1 254 aaPredicted RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 TAS2R4Q9NYW5 299 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 ZNF319Q9P2F9 582 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 MYEF2Q9P2K5 600 aaKnown RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 TNFSF18Q9UNG2 199 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 A0A0G2JNJ9 132 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 A0A1B0GTI1 187 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 C5orf63A6NC05 138 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 FAM74A7A6NL05 159 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 CCSO14618 274 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 BCL2L11O43521 198 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 HLA-AP01891 365 aaKnown RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 COX5AP20674 150 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 CCNOP22674 350 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 ARR3P36575 388 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 ZNF345Q14585 488 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 GABRA6Q16445 453 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 FAM74A3Q4VXF1 159 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 TMEM244Q5VVB8 128 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 LPCAT3Q6P1A2 487 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 BEND4Q6ZU67 534 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 CXorf67Q86X51 503 aaPredicted RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 TMEM185AQ8NFB2 350 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 NANOS1Q8WY41 292 aaKnown RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 MARC2Q969Z3 335 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 ZNF75AQ96N20 296 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 MYOZ1Q9NP98 299 aaPredicted RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 Q9UFV3 132 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 CGGBP1Q9UFW8 167 aaPredicted RBP10.76□□□□□ -0.69
CIITA-202ENST00000381835 HHLA2Q9UM44 414 aa10.76□□□□□ -0.69
CIITA-202ENST00000381835 MPTX1A8MV57 137 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 EEF1E1-BLOC1S5C9J1V9 151 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 E9PLN8 166 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 NDUFA2O43678 99 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 APOC1P02654 83 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 SLC25A4P12235 298 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 CCL2P13500 99 aa10.75□□□□□ -0.69
CIITA-202ENST00000381835 UBE2NP61088 152 aaKnown RBP10.75□□□□□ -0.69
CIITA-202ENST00000381835 HGFACQ04756 655 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms