RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 VHLLQ6RSH7 139 aa16.72■□□□□ 0.27
CCM2-202ENST00000381112 PIAS4Q8N2W9 510 aaPredicted RBP16.72■□□□□ 0.27
CCM2-202ENST00000381112 ARHGAP5-AS1Q96IT6 56 aa16.72■□□□□ 0.27
CCM2-202ENST00000381112 KCNJ16Q9NPI9 418 aa16.72■□□□□ 0.27
CCM2-202ENST00000381112 hCG_2014768A0A024R1R8 64 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 IGLV3-9A0A075B6K5 115 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 J3QT63 122 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 MFNGO00587 321 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 AKR7A2O43488 359 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 CYB5AP00167 134 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 GSTT2BP0CG30 244 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 BCL3P20749 454 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 BLVRBP30043 206 aaPredicted RBP16.71■□□□□ 0.27
CCM2-202ENST00000381112 KLF3P57682 345 aaPredicted RBP16.71■□□□□ 0.27
CCM2-202ENST00000381112 AP3S2P59780 193 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 SORDQ00796 357 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 TLE1Q04724 770 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 SSBP1Q04837 148 aaKnown RBP16.71■□□□□ 0.27
CCM2-202ENST00000381112 OR10AD1Q8NGE0 317 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 OR13G1Q8NGZ3 307 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 LRRC46Q96FV0 321 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 MSL2Q9HCI7 577 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.71■□□□□ 0.27
CCM2-202ENST00000381112 TMEM210A6NLX4 147 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 F8VVB4 439 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 F8VWA3 439 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 KIR2DL3P43628 341 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 TAF9Q16594 264 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 PIGYQ3MUY2 71 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 OLFML2AQ68BL7 652 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 C7orf50Q9BRJ6 194 aaKnown RBP16.71■□□□□ 0.27
CCM2-202ENST00000381112 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.71■□□□□ 0.271e-6■■■■□ 24.6
CCM2-202ENST00000381112 ST3GAL6Q9Y274 331 aa16.71■□□□□ 0.27
CCM2-202ENST00000381112 SMG1Q96Q15 3661 aaKnown RBP16.7■□□□□ 0.26
CCM2-202ENST00000381112 RELNP78509 3460 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 CADP27708 2225 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 MEIS3P1A6NDR6 274 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 GABRR1P24046 479 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 BTCP35070 178 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 RBM11P57052 281 aaKnown RBP16.7■□□□□ 0.26
CCM2-202ENST00000381112 ZNF154Q13106 437 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 SIGIRRQ6IA17 410 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 SPERTQ8NA61 448 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 POM121Q96HA1 1249 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 CYYR1Q96J86 154 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 SYT3Q9BQG1 590 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 CXXC4Q9H2H0 198 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 CA10Q9NS85 328 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 NKIRAS2Q9NYR9 191 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 TAS2R8Q9NYW2 309 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 NDRG3Q9UGV2 375 aa16.7■□□□□ 0.26
CCM2-202ENST00000381112 CACNA1BQ00975 2339 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 CENPXA8MT69 81 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 TRAPPC2LH3BP13 241 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 GEMIN2O14893 280 aaKnown RBP16.69■□□□□ 0.26
CCM2-202ENST00000381112 RHBDL1O75783 438 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 SLC6A1P30531 599 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 FGF12P61328 243 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 SNTB1Q13884 538 aaKnown RBP16.69■□□□□ 0.26
CCM2-202ENST00000381112 DAZAP2Q15038 168 aaPredicted RBP16.69■□□□□ 0.26
CCM2-202ENST00000381112 PNLIPRP3Q17RR3 467 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 PCGF3Q3KNV8 242 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 SLC22A25Q6T423 547 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 BATF2Q8N1L9 274 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 SCCPDHQ8NBX0 429 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 DUSP18Q8NEJ0 188 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 ENKURQ8TC29 256 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 NUDCD2Q8WVJ2 157 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 ST8SIA4Q92187 359 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 PECRQ9BY49 303 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 MRPL37Q9BZE1 423 aaKnown RBP16.69■□□□□ 0.26
CCM2-202ENST00000381112 ZNF581Q9P0T4 197 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 FAM240BA0A1B0GVZ2 78 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 F5H5P2 479 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 SSX5O60225 188 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 CSF1P09603 554 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 ACTBP60709 375 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 ACTG1P63261 375 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 TFF3Q07654 80 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 MAB21L1Q13394 359 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 NHLRC3Q5JS37 347 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 NCMAPQ5T1S8 102 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 LINC01560Q8TB33 94 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 MRPL24Q96A35 216 aaKnown RBP16.69■□□□□ 0.26
CCM2-202ENST00000381112 HS3ST6Q96QI5 342 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 HRASLSQ9HDD0 168 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 FAIMQ9NVQ4 179 aa16.69■□□□□ 0.26
CCM2-202ENST00000381112 ARL6IP1Q15041 203 aa16.68■□□□□ 0.26
CCM2-202ENST00000381112 TRAPPC6BQ86SZ2 158 aa16.68■□□□□ 0.26
CCM2-202ENST00000381112 GTF3AQ92664 365 aaKnown RBP16.68■□□□□ 0.26
CCM2-202ENST00000381112 ZNF488Q96MN9 340 aa16.68■□□□□ 0.26
CCM2-202ENST00000381112 ESRP2Q9H6T0 727 aaKnown RBP16.68■□□□□ 0.26
CCM2-202ENST00000381112 ZNF442Q9H7R0 627 aa16.68■□□□□ 0.26
CCM2-202ENST00000381112 HSF4Q9ULV5 492 aa16.68■□□□□ 0.26
CCM2-202ENST00000381112 ZSCAN5BA6NJL1 495 aa16.67■□□□□ 0.26
CCM2-202ENST00000381112 MT-ND4P03905 459 aa16.67■□□□□ 0.26
CCM2-202ENST00000381112 GRPP07492 148 aa16.67■□□□□ 0.26
CCM2-202ENST00000381112 GNG2P59768 71 aa16.67■□□□□ 0.26
CCM2-202ENST00000381112 SELENOVP59797 346 aa16.67■□□□□ 0.26
CCM2-202ENST00000381112 PLA1AQ53H76 456 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms