RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 OR2T27Q8NH04 317 aa14.02□□□□□ -0.17
HMGN1-204ENST00000380749 TMEM163Q8TC26 289 aa14.02□□□□□ -0.17
HMGN1-204ENST00000380749 NPFFR1Q9GZQ6 430 aa14.02□□□□□ -0.17
HMGN1-204ENST00000380749 A0A0G2JK05 382 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 KRT8P05787 483 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 KIR2DS4P43632 304 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 BMXP51813 675 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 EFNB2P52799 333 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 SLX4IPQ5VYV7 408 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 TMEM200BQ69YZ2 307 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 BCDIN3DQ7Z5W3 292 aaKnown RBP14.01□□□□□ -0.17
HMGN1-204ENST00000380749 OR4M1Q8NGD0 313 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 OR14K1Q8NGZ2 314 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 UTP4Q969X6 686 aaKnown RBP14.01□□□□□ -0.17
HMGN1-204ENST00000380749 PKIBQ9C010 78 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 HES4Q9HCC6 221 aa14.01□□□□□ -0.17
HMGN1-204ENST00000380749 ZAR1LA6NP61 321 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 G3V2T6 193 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 MAGEB4O15481 346 aaPredicted RBP14□□□□□ -0.17
HMGN1-204ENST00000380749 TK1P04183 234 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 CCL3L1P16619 93 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 ZNF273Q14593 569 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 AADACL4Q5VUY2 407 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 C12orf73Q69YU5 71 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 ZNF782Q6ZMW2 699 aaPredicted RBP14□□□□□ -0.17
HMGN1-204ENST00000380749 CALHM1Q8IU99 346 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 BATF2Q8N1L9 274 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 YIPF7Q8N8F6 280 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 ASCC1Q8N9N2 400 aaKnown RBP14□□□□□ -0.17
HMGN1-204ENST00000380749 PPP1R35Q8TAP8 253 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 TRMT10AQ8TBZ6 339 aaKnown RBP14□□□□□ -0.17
HMGN1-204ENST00000380749 FOXRED1Q96CU9 486 aaPredicted RBP14□□□□□ -0.17
HMGN1-204ENST00000380749 SLC7A6OSQ96CW6 309 aaPredicted RBP14□□□□□ -0.17
HMGN1-204ENST00000380749 AJUBAQ96IF1 538 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 MRM2Q9UI43 246 aaKnown RBP14□□□□□ -0.17
HMGN1-204ENST00000380749 SLC7A11Q9UPY5 501 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 SIGLEC9Q9Y336 463 aa14□□□□□ -0.17
HMGN1-204ENST00000380749 A0A1B0GTI1 187 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 A6NIN4 97 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 MITFO75030 526 aaPredicted RBP13.99□□□□□ -0.17
HMGN1-204ENST00000380749 GATBO75879 557 aaKnown RBP13.99□□□□□ -0.17
HMGN1-204ENST00000380749 PIPP12273 146 aaPredicted RBP13.99□□□□□ -0.17
HMGN1-204ENST00000380749 CCL1P22362 96 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 IL24Q13007 206 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 ATP6AP1Q15904 470 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 Q6ZSR3 168 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 C1QL4Q86Z23 238 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 KLHDC1Q8N7A1 406 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 BCAS4Q8TDM0 211 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 IL4I1Q96RQ9 567 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 TBX5Q99593 518 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 GABARAPL1Q9H0R8 117 aa13.99□□□□□ -0.17
HMGN1-204ENST00000380749 WARS2Q9UGM6 360 aaKnown RBP13.99□□□□□ -0.17
HMGN1-204ENST00000380749 FAM230AA0A1W2PPH8 454 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 K7N7A8 449 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 SYT7O43581 403 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 RPP14O95059 124 aaKnown RBP13.98□□□□□ -0.17
HMGN1-204ENST00000380749 PAX6P26367 422 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 EFNB1P98172 346 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 ODF4Q2M2E3 257 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 CRIP3Q6Q6R5 217 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 GDPD3Q7L5L3 318 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 ZDHHC13Q8IUH4 622 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 C11orf42Q8N5U0 333 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 OR13D1Q8NGV5 346 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 SLC22A13Q9Y226 551 aa13.98□□□□□ -0.17
HMGN1-204ENST00000380749 TBL2Q9Y4P3 447 aaKnown RBP13.98□□□□□ -0.17
HMGN1-204ENST00000380749 CHST1O43916 411 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 RBP4P02753 201 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 CHRM2P08172 466 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 FASP25445 335 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 EPHA2P29317 976 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 EDDM3BP56851 147 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 ERVK11-1P61568 191 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 COL10A1Q03692 680 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 KDM4DQ6B0I6 523 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 CATSPERDQ86XM0 798 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 ANGPTL5Q86XS5 388 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 CCDC54Q8NEL0 328 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 CEP19Q96LK0 163 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 NKX3-1Q99801 234 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-204ENST00000380749 ADI1Q9BV57 179 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 ABCB10Q9NRK6 738 aa13.97□□□□□ -0.17
HMGN1-204ENST00000380749 C17orf98A8MV24 154 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 VGLL3A8MV65 326 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 ARG1P05089 322 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 OR2T7P0C7T2 308 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 ZNF728P0DKX0 622 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 PLA1AQ53H76 456 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 SSX6Q7RTT6 188 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 FAM220AQ7Z4H9 259 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 LHFPL4Q7Z7J7 247 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 OR8H2Q8N162 312 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 C11orf44Q8N8P7 122 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 RPS4Y2Q8TD47 263 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 CDCA4Q9BXL8 241 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 CADM1Q9BY67 442 aaKnown RBP13.96□□□□□ -0.17
HMGN1-204ENST00000380749 CHST5Q9GZS9 411 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 PITPNC1Q9UKF7 332 aa13.96□□□□□ -0.17
HMGN1-204ENST00000380749 FOXJ3Q9UPW0 622 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms