RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 LAMP3Q9UQV4 416 aa6.44□□□□□ -1.38
TRIM6-202ENST00000380097 NOTCH4Q99466 2003 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 IGKV1D-42A0A075B6H8 117 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 PRSS37A4D1T9 235 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 MASP2O00187 686 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 OR4A8P0C604 315 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 SFTPDP35247 375 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 PTGER4P35408 488 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 ROM1Q03395 351 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 PNRC1Q12796 327 aaPredicted RBP6.43□□□□□ -1.38
TRIM6-202ENST00000380097 C1orf140Q5VVS0 124 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 FBXO42Q6P3S6 717 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 PARM1Q6UWI2 310 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 NECAP1Q8NC96 275 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 VPS25Q9BRG1 176 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 PARD6GQ9BYG4 376 aaPredicted RBP6.43□□□□□ -1.38
TRIM6-202ENST00000380097 OR8D2Q9GZM6 311 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 PHPT1Q9NRX4 125 aaPredicted RBP6.43□□□□□ -1.38
TRIM6-202ENST00000380097 RHBDD3Q9Y3P4 386 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 B3GALT1Q9Y5Z6 326 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 ZFP92A6NM28 416 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 K7N7A8 449 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 SIAH2O43255 324 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 SPINT1O43278 529 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 ATP6V0CP27449 155 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 ZNF117Q03924 483 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 CLN3Q13286 438 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 CLEC12BQ2HXU8 276 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 TMEM176BQ3YBM2 270 aaPredicted RBP6.43□□□□□ -1.38
TRIM6-202ENST00000380097 CMTM1Q8IZ96 169 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 ZNF775Q96BV0 537 aaPredicted RBP6.43□□□□□ -1.38
TRIM6-202ENST00000380097 RBMXL1Q96E39 390 aaKnown RBP6.43□□□□□ -1.38
TRIM6-202ENST00000380097 COX14Q96I36 57 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 ABHD14AQ9BUJ0 271 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 PLA2G2FQ9BZM2 168 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 LPAR5Q9H1C0 372 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 ARV1Q9H2C2 271 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 FKBP11Q9NYL4 201 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 VAX2Q9UIW0 290 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 TUBD1Q9UJT1 453 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 PADI1Q9ULC6 663 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 SRPK3Q9UPE1 567 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 COA3Q9Y2R0 106 aaPredicted RBP6.43□□□□□ -1.38
TRIM6-202ENST00000380097 MTCH2Q9Y6C9 303 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 SCDO00767 359 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 MPZL1O95297 269 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 CYB5R3P00387 301 aaPredicted RBP6.43□□□□□ -1.38
TRIM6-202ENST00000380097 ASAH2BP0C7U1 165 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 FGF5P12034 268 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 CCKARP32238 428 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 COL10A1Q03692 680 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 ZNF141Q15928 474 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 ACKR1Q16570 336 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 CPEB2Q7Z5Q1 589 aaKnown RBP6.43□□□□□ -1.38
TRIM6-202ENST00000380097 LRRC75AQ8NAA5 344 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 STT3BQ8TCJ2 826 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 GPR119Q8TDV5 335 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 FGF14Q92915 247 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 EXTL1Q92935 676 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 REEP6Q96HR9 211 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 CCDC3Q9BQI4 270 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 TMEM74BQ9NUR3 256 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 OSGIN2Q9Y236 505 aa6.43□□□□□ -1.38
TRIM6-202ENST00000380097 TRPM6Q9BX84 2022 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 RP1L1Q8IWN7 2480 aaPredicted RBP6.42□□□□□ -1.38
TRIM6-202ENST00000380097 KNTC1P50748 2209 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 TMEM210A6NLX4 147 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 ZNF217O75362 1048 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 RPS2P15880 293 aaKnown RBP6.42□□□□□ -1.38
TRIM6-202ENST00000380097 CTLA4P16410 223 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 DUSP1P28562 367 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 BLVRBP30043 206 aaPredicted RBP6.42□□□□□ -1.38
TRIM6-202ENST00000380097 CTHP32929 405 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 GALNSP34059 522 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 ECI1P42126 302 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 PIGPP57054 158 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 GAGE1Q13065 139 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 ELAVL3Q14576 367 aaKnown RBP6.42□□□□□ -1.38
TRIM6-202ENST00000380097 ADIRFQ15847 76 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 PLAC9Q5JTB6 97 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 Q5PR19 223 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 BTNL3Q6UXE8 466 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 SSX7Q7RTT5 188 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 PRSS41Q7RTY9 318 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 LRP11Q86VZ4 500 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 ARHGEF39Q8N4T4 335 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 TMEM52Q8NDY8 209 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 ELOVL1Q9BW60 279 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 VN1R1Q9GZP7 353 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 OR10A2Q9H208 303 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 POLR1DQ9Y2S0 133 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 DENND4CQ5VZ89 1909 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 GVINP1Q7Z2Y8 2422 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 ZNF850A8MQ14 1090 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 CEACAM18A8MTB9 384 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 CIDEAO60543 219 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 MMP9P14780 707 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 PEBP1P30086 187 aaKnown RBP6.42□□□□□ -1.38
TRIM6-202ENST00000380097 FXYD4P59646 89 aa6.42□□□□□ -1.38
TRIM6-202ENST00000380097 RPL27P61353 136 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms