RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SLC10A1Q14973 349 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CMBLQ96DG6 245 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 BSCL2Q96G97 398 aaPredicted RBP7.47□□□□□ -1.21
VPS36-201ENST00000378060 GPA33Q99795 319 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 ZNF251Q9BRH9 671 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 CHRDL1Q9BU40 450 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 FAM234AQ9H0X4 552 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 NAA60Q9H7X0 242 aa7.47□□□□□ -1.21
VPS36-201ENST00000378060 DSPPQ9NZW4 1301 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 A0A1W2PPV9 198 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 MASP2O00187 686 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 CDC14BO60729 498 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 PDCD6O75340 191 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 CLN5O75503 358 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 CTSDP07339 412 aaPredicted RBP7.46□□□□□ -1.21
VPS36-201ENST00000378060 IAPPP10997 89 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 RBPJQ06330 500 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 SMAD4Q13485 552 aaKnown RBP7.46□□□□□ -1.21
VPS36-201ENST00000378060 SP6Q3SY56 376 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 GGNBP1Q5YKI7 109 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 VHLLQ6RSH7 139 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 SPEM1Q8N4L4 309 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 OR2C3Q8N628 320 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 TAAR6Q96RI8 345 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 S1PR3Q99500 378 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 MENTQ9BUN1 341 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 EDEM2Q9BV94 578 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 C12orf49Q9H741 205 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 FBXL17Q9UF56 701 aa7.46□□□□□ -1.21
VPS36-201ENST00000378060 PCDHGA9Q9Y5G4 932 aaKnown RBP7.46□□□□□ -1.21
VPS36-201ENST00000378060 A0A1W2PPQ1 181 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 FAM166BA8MTA8 275 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 FGF7P21781 194 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 ZNF345Q14585 488 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 GAB4Q2WGN9 574 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 MOGAT2Q3SYC2 334 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 C1QTNF12Q5T7M4 302 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 OR5AS1Q8N127 324 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 PTX4Q96A99 478 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 SEC11CQ9BY50 192 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 CRLF2Q9HC73 371 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 SIRPB1O00241 398 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 RER1O15258 196 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 GABRA4P48169 554 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 SLC37A1P57057 533 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 UBE2G1P62253 170 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 RANP62826 216 aaKnown RBP7.46□□□□□ -1.22
VPS36-201ENST00000378060 GNG3P63215 75 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 TMEM65Q6PI78 240 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 BATF2Q8N1L9 274 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 CHAC2Q8WUX2 184 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.46□□□□□ -1.22
VPS36-201ENST00000378060 C10orf35Q96D05 121 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 CHD5Q8TDI0 1954 aa7.46□□□□□ -1.22
VPS36-201ENST00000378060 AQP7P3A6NL99 342 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 SPRY1O43609 319 aaPredicted RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 LIMS1P48059 325 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 SNRPEP62304 92 aaKnown RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 OR8B8Q15620 311 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 ZNF321PQ8N8H1 164 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 ADPRHL1Q8NDY3 354 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 OR6X1Q8NH79 312 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 AKR7LQ8NHP1 331 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 IFI44Q8TCB0 444 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 ERGIC1Q969X5 290 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 TRMT61AQ96FX7 289 aaKnown RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 ST6GALNAC2Q9UJ37 374 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 CES1P1Q9UKY3 287 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 PCOLCE2Q9UKZ9 415 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 APC2O95996 2303 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 PHOX2AO14813 284 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 LANCL1O43813 399 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 PTP4A3O75365 173 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 PIAS2O75928 621 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 MEOX2P50222 304 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 INSM1Q01101 510 aaPredicted RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 PNRC1Q12796 327 aaPredicted RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 C4orf17Q53FE4 359 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 SEZ6L2Q6UXD5 910 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 SIGLECL1Q8N7X8 197 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 CADM4Q8NFZ8 388 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 OR4D10Q8NGI6 311 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 MCHR2Q969V1 340 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 GALMQ96C23 342 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 GABRG3Q99928 467 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 EGLN1Q9GZT9 426 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 RPH3ALQ9UNE2 315 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 ZNF891A8MT65 544 aaPredicted RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 CYR61O00622 381 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 ENSAO43768 121 aaKnown RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 EDN3P14138 238 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 CHRNB4P30926 498 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 AKR1C3P42330 323 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 MMP16P51512 607 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 TMEM33P57088 247 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 LSM6P62312 80 aaKnown RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 FABP9Q0Z7S8 132 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 GGTLC2Q14390 218 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 ZNF718Q3SXZ3 478 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 MESTQ5EB52 335 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms