RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 DTX4Q9Y2E6 619 aa16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 MAP1BP46821 2468 aaKnown RBP16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 DOCK3Q8IZD9 2030 aa16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 XKRY2A2RUG3 117 aa16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 CYTIPO60759 359 aa16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 PRSS53Q2L4Q9 553 aa16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 COL13A1Q5TAT6 717 aaPredicted RBP16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 OR1J1Q8NGS3 322 aa16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 LHX9Q9NQ69 397 aa16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 RYDENQ9NUL5 291 aaKnown RBP16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 CYB5R1Q9UHQ9 305 aa16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 MAFAQ8NHW3 353 aaPredicted RBP16.61■□□□□ 0.25
CNTNAP3B-203ENST00000377561 DUS4LO95620 317 aaKnown RBP16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 LIMS1P48059 325 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 NOVA1P51513 510 aaKnown RBP16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 PDZD11Q5EBL8 140 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 UQCC3Q6UW78 93 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 GFRALQ6UXV0 394 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 SCN10AQ9Y5Y9 1956 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 HMSDA8MTL9 139 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 CRYABP02511 175 aaKnown RBP16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 SPATA46Q5T0L3 261 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 OR2A2Q6IF42 318 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 Q8IYB0 196 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 OR8B12Q8NGG6 310 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 M1APQ8TC57 530 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 MPLP40238 635 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 IFITM3Q01628 133 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 PABPC1L2AQ5JQF8 200 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 PLAC9Q5JTB6 97 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 NHLRC1Q6VVB1 395 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 ZNRF4Q8WWF5 429 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 C6orf201Q7Z4U5 140 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 GALMQ96C23 342 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 HNF1AP20823 631 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 FAAP24Q9BTP7 215 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 PILRAQ9UKJ1 303 aa16.6■□□□□ 0.25
CNTNAP3B-203ENST00000377561 ZNF787Q6DD87 383 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 OR5M8Q8NGP6 311 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 ZDHHC16Q969W1 377 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 RPUSD4Q96CM3 377 aaKnown RBP16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 IFT22Q9H7X7 185 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 ST6GALNAC2Q9UJ37 374 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 SLC25A6P12236 298 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 RAC3P60763 192 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 LSM6P62312 80 aaKnown RBP16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 GGTLC2Q14390 218 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 SP6Q3SY56 376 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 RPL7L1Q6DKI1 246 aaKnown RBP16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 SLC39A7Q92504 469 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 KCNK15Q9H427 330 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 TMED3Q9Y3Q3 217 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 TRGV10A0A0A0MS01 117 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 TRIM77I1YAP6 450 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 CST4P01036 141 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 FUT5Q11128 374 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 RHOFQ9HBH0 211 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 CLEC1BQ9P126 229 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 MT-CO3P00414 261 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 ZXDCQ2QGD7 858 aaPredicted RBP16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 OR2Y1Q8NGV0 311 aa16.59■□□□□ 0.25
CNTNAP3B-203ENST00000377561 TO15178 435 aa16.58■□□□□ 0.25
CNTNAP3B-203ENST00000377561 IGKV1D-16P01601 117 aa16.58■□□□□ 0.25
CNTNAP3B-203ENST00000377561 JMJD6Q6NYC1 403 aaPredicted RBP16.58■□□□□ 0.25
CNTNAP3B-203ENST00000377561 FAHD2BQ6P2I3 314 aaPredicted RBP16.58■□□□□ 0.25
CNTNAP3B-203ENST00000377561 C9orf40Q8IXQ3 194 aa16.58■□□□□ 0.25
CNTNAP3B-203ENST00000377561 PIK3IP1Q96FE7 263 aa16.58■□□□□ 0.25
CNTNAP3B-203ENST00000377561 FAHD2AQ96GK7 314 aa16.58■□□□□ 0.25
CNTNAP3B-203ENST00000377561 DSPPQ9NZW4 1301 aa16.58■□□□□ 0.25
CNTNAP3B-203ENST00000377561 OR2M5A3KFT3 312 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 MPC2O95563 127 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 FOXC1Q12948 553 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 GVQW1Q8N7I0 195 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 ZNF835Q9Y2P0 537 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 H3BMH7 237 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 SELENOPP49908 381 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 OR2B8PP59922 312 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 ALKBH6Q3KRA9 238 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 C20orf196Q8IYI0 205 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 NECAP1Q8NC96 275 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 OR10AD1Q8NGE0 317 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 SH2D7A6NKC9 451 aaPredicted RBP16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 TNFRSF1AP19438 455 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 LRRTM1Q86UE6 522 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 CLDN23Q96B33 292 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 OCIAD1Q9NX40 245 aa16.58■□□□□ 0.24
CNTNAP3B-203ENST00000377561 PDCD6O75340 191 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 NTF3P20783 257 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 PRDX4Q13162 271 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 KLF9Q13886 244 aaPredicted RBP16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 ZNF766Q5HY98 468 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 DGAT2L6Q6ZPD8 337 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 C17orf78Q8N4C9 275 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 ERGIC1Q969X5 290 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 FBXO17Q96EF6 278 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 TRMT61AQ96FX7 289 aaKnown RBP16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 INHBBP09529 407 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 FCER1GP30273 86 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 PDCD1Q15116 288 aa16.57■□□□□ 0.24
CNTNAP3B-203ENST00000377561 SFTPA2Q8IWL1 248 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms