RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 IRF2P14316 349 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 SSTR2P30874 369 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 GATA4P43694 442 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 SNU13P55769 128 aaKnown RBP10.94□□□□□ -0.66
CBWD3-203ENST00000377344 PLA2G7Q13093 441 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 ZNF787Q6DD87 383 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 LAX1Q8IWV1 398 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 LRRC29Q8WV35 223 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 TMEM59Q9BXS4 323 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 PCDHB16Q9NRJ7 776 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 RBFOX1Q9NWB1 397 aaKnown RBP10.94□□□□□ -0.66
CBWD3-203ENST00000377344 ETV7Q9Y603 341 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 A3GALT2U3KPV4 340 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 CACNA1DQ01668 2161 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 ARFGEF3Q5TH69 2177 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 F8VVB4 439 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 F8VWA3 439 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 NXPH2O95156 264 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 GTF2F2P13984 249 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 MGMTP16455 207 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 PMELP40967 661 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 EFNB2P52799 333 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 ART1P52961 327 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 SCAND1P57086 179 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 HOXA4Q00056 320 aaPredicted RBP10.93□□□□□ -0.66
CBWD3-203ENST00000377344 DYNC1I2Q13409 638 aaKnown RBP10.93□□□□□ -0.66
CBWD3-203ENST00000377344 UNC119Q13432 240 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 ASCL4Q6XD76 172 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 OR2W3Q7Z3T1 314 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 TGIF2LYQ8IUE0 185 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 OR11L1Q8NGX0 322 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 CCL17Q92583 94 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 ERGIC1Q969X5 290 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 SELENOIQ9C0D9 397 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 PEX16Q9Y5Y5 336 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 CHD3Q12873 2000 aaKnown RBP10.93□□□□□ -0.66
CBWD3-203ENST00000377344 IGHV1-69-2A0A0G2JMI3 117 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 LRRC30A6NM36 301 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 TMEM14DPA8MWL7 114 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 H7C417 338 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 HAX1O00165 279 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 CYB5R3P00387 301 aaPredicted RBP10.93□□□□□ -0.66
CBWD3-203ENST00000377344 PGA5P0DJD9 388 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 PRKACAP17612 351 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 GLRA1P23415 457 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 QRFPP83859 136 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 UBE2NLQ5JXB2 153 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 METAP1DQ6UB28 335 aaPredicted RBP10.93□□□□□ -0.66
CBWD3-203ENST00000377344 Q8IYB0 196 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 OSR2Q8N2R0 312 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 POC1AQ8NBT0 407 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 NRGNQ92686 78 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 EMG1Q92979 244 aaKnown RBP10.93□□□□□ -0.66
CBWD3-203ENST00000377344 PHF21AQ96BD5 680 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 ATG5Q9H1Y0 275 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 LIME1Q9H400 295 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 RHBDL2Q9NX52 303 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 IL36GQ9NZH8 169 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 RNF7Q9UBF6 113 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 RAB22AQ9UL26 194 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 CACNG2Q9Y698 323 aa10.93□□□□□ -0.66
CBWD3-203ENST00000377344 WNT9BO14905 357 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 LDLRAD4O15165 306 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 LY6HO94772 140 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 EIF4EP06730 217 aaKnown RBP10.92□□□□□ -0.66
CBWD3-203ENST00000377344 MADCAM1Q13477 382 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 PIGYQ3MUY2 71 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 FAM58AQ8N1B3 248 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 DTX3Q8N9I9 347 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 OR51T1Q8NGJ9 327 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 OR6Q1Q8NGQ2 317 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 NEU4Q8WWR8 484 aaPredicted RBP10.92□□□□□ -0.66
CBWD3-203ENST00000377344 HPS1Q92902 700 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 SLC25A38Q96DW6 304 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 NRIP2Q9BQI9 281 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 URM1Q9BTM9 101 aaKnown RBP10.92□□□□□ -0.66
CBWD3-203ENST00000377344 WDR13Q9H1Z4 485 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 MIXL1Q9H2W2 232 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 CXorf56Q9H5V9 222 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 ADAM30Q9UKF2 790 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 ST3GAL6Q9Y274 331 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 DSCAMO60469 2012 aa10.92□□□□□ -0.66
CBWD3-203ENST00000377344 METTL21EPA6NDL7 271 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 LYNX1G3V0Z9 82 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 LYNX1P0DP58 116 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 ELK1P19419 428 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 RAB6AP20340 208 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 GABRR1P24046 479 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 HFEQ30201 348 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 CMTM4Q8IZR5 234 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 GCSAMQ8N6F7 178 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 C19orf18Q8NEA5 215 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 OR10Z1Q8NGY1 313 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 Q8TCH9 128 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 SEH1LQ96EE3 360 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 S100A16Q96FQ6 103 aaKnown RBP10.91□□□□□ -0.66
CBWD3-203ENST00000377344 DIRAS2Q96HU8 199 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 DCAF16Q9NXF7 216 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 DNAJB11Q9UBS4 358 aa10.91□□□□□ -0.66
CBWD3-203ENST00000377344 SRRM5B3KS81 715 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms