RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 B3GALT4O96024 378 aa11.21□□□□□ -0.62
VPS13A-204ENST00000376634 ZNF766Q5HY98 468 aa11.21□□□□□ -0.62
VPS13A-204ENST00000376634 SYS1Q8N2H4 156 aa11.21□□□□□ -0.62
VPS13A-204ENST00000376634 HSPB8Q9UJY1 196 aa11.21□□□□□ -0.62
VPS13A-204ENST00000376634 A4GNTQ9UNA3 340 aa11.21□□□□□ -0.62
VPS13A-204ENST00000376634 IGLV3-10A0A075B6K4 115 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 HRO43593 1189 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 B4GALT3O60512 393 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 ZNF141Q15928 474 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 CCSMST1Q4G0I0 132 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 K7ESF4 209 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 M0R1X1 148 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 UQCC1Q9NVA1 299 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 MED29Q9NX70 200 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 ZAR1LA6NP61 321 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 M0R2Z0 102 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 ZNF26P17031 533 aaPredicted RBP11.2□□□□□ -0.62
VPS13A-204ENST00000376634 DCTDP32321 178 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 OR1C1Q15619 314 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 OR10V1Q8NGI7 309 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 SPG11Q96JI7 2443 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 PGA3P0DJD8 388 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 ATP6V1FQ16864 119 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 PDPNQ86YL7 162 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
VPS13A-204ENST00000376634 NPAS1Q99742 590 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 RAB1BQ9H0U4 201 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.2□□□□□ -0.62
VPS13A-204ENST00000376634 EPXP11678 715 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 LGALS7P47929 136 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 RNF2Q99496 336 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 LCTP09848 1927 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 CDK5R1Q15078 307 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 XKR7Q5GH72 579 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 ABLIM2Q6H8Q1 611 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 OR52L2PQ8NGH6 319 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 OR2V1Q8NHB1 315 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 PHYHIPLQ96FC7 376 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 RAB40CQ96S21 281 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 HSD17B10Q99714 261 aaKnown RBP11.2□□□□□ -0.62
VPS13A-204ENST00000376634 SLC35B3Q9H1N7 401 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 ISG20L2Q9H9L3 353 aaKnown RBP11.2□□□□□ -0.62
VPS13A-204ENST00000376634 SH2D2AQ9NP31 389 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 MED12LQ86YW9 2145 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 ZNF83P51522 516 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 CCR5P51681 352 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 B2MP61769 119 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 FAM53BQ14153 422 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 GAMTQ14353 236 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 OR4C3Q8NH37 302 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 SBF2Q86WG5 1849 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 SLC35E4Q6ICL7 350 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 UBALD1Q8TB05 177 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 MANBALQ9NQG1 85 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 FOXJ3Q9UPW0 622 aa11.2□□□□□ -0.62
VPS13A-204ENST00000376634 FUT3P21217 361 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 CD40P25942 277 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 TMEM37Q8WXS4 190 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 FZR1Q9UM11 496 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 UBR3Q6ZT12 1888 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 LINC01553A4QN01 128 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 ZNF737O75373 536 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 EVX1P49640 407 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 ASB16Q96NS5 453 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 C20orf27Q9GZN8 174 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 RTP5Q14D33 572 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 LRP11Q86VZ4 500 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 TGIF2LYQ8IUE0 185 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 SLC7A10Q9NS82 523 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 PPIL1Q9Y3C6 166 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 TM4SF4P48230 202 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 MMP15P51511 669 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 PNLIPRP2P54317 469 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 RPL30P62888 115 aaKnown RBP11.19□□□□□ -0.62
VPS13A-204ENST00000376634 CDC20Q12834 499 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 Q3ZCU0 254 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 CLLU1Q5K131 121 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 OR1L3Q8NH93 324 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 POM121Q96HA1 1249 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 ADAM20O43506 726 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 THBS4P35443 961 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 SULT1A1P50225 295 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 SLC38A11Q08AI6 406 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 ZNF77Q15935 545 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 CRYGNQ8WXF5 182 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 HLXQ14774 488 aaPredicted RBP11.19□□□□□ -0.62
VPS13A-204ENST00000376634 OR4A4PQ8NGN8 299 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 GPR137Q96N19 417 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 TMEM229BQ8NBD8 167 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 SMIM4Q8WVI0 70 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 AUNIPQ9H7T9 357 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 COA4Q9NYJ1 87 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 TCF20Q9UGU0 1960 aaKnown RBP11.19□□□□□ -0.62
VPS13A-204ENST00000376634 SEMA7AO75326 666 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 DEDDO75618 318 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 ABLIM3O94929 683 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 FAM87AP0C7U9 286 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 LYG1Q8N1E2 194 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 SLC25A22Q9H936 323 aa11.19□□□□□ -0.62
VPS13A-204ENST00000376634 MMP17Q9ULZ9 603 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms