RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SEBOXQ9HB31 216 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 FAM212BQ9NTI7 297 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 PLEKHJ1Q9NW61 149 aa12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 COL5A1P20908 1838 aaPredicted RBP12.34□□□□□ -0.43
CLCNKA-202ENST00000375692 A0A1W2PPE2 198 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 CRYM-AS1A6NIL9 109 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 NAT2P11245 290 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 PRF1P14222 555 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 RAB5AP20339 215 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 OPRM1P35372 400 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 ASCL1P50553 236 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 SURF2Q15527 256 aaPredicted RBP12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 TMEM156Q8N614 296 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 UBAC2Q8NBM4 344 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 STT3BQ8TCJ2 826 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 CD300LFQ8TDQ1 290 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 ARRDC1-AS1Q9H2J1 176 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 SDHAF3Q9NRP4 125 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 PPP4R1LQ9P1A2 415 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 MIOXQ9UGB7 285 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 PADI1Q9ULC6 663 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 FBXO7Q9Y3I1 522 aa12.33□□□□□ -0.43
CLCNKA-202ENST00000375692 OR5H15A6NDH6 313 aa12.33□□□□□ -0.44
CLCNKA-202ENST00000375692 TMEM225BP0DP42 221 aa12.33□□□□□ -0.44
CLCNKA-202ENST00000375692 CAMLGP49069 296 aa12.33□□□□□ -0.44
CLCNKA-202ENST00000375692 FAM189A2Q15884 450 aa12.33□□□□□ -0.44
CLCNKA-202ENST00000375692 PLPPR5Q32ZL2 321 aa12.33□□□□□ -0.44
CLCNKA-202ENST00000375692 LYZL2Q7Z4W2 148 aa12.33□□□□□ -0.44
CLCNKA-202ENST00000375692 S100A13Q99584 98 aa12.33□□□□□ -0.44
CLCNKA-202ENST00000375692 FAAP24Q9BTP7 215 aa12.33□□□□□ -0.44
CLCNKA-202ENST00000375692 RFNGQ9Y644 331 aa12.33□□□□□ -0.44
CLCNKA-202ENST00000375692 TRBV23-1A0A0A0MS06 115 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 SERPINE3A8MV23 424 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 UMAD1C9J7I0 102 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 PRH1P02810 166 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 CTSDP07339 412 aaPredicted RBP12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 OR8U8P0C7N1 319 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 DANCRP0C864 163 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 OR13C7P0DN81 318 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 GLP1RP43220 463 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 PRSS12P56730 875 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 PIGPP57054 158 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 PEAR1Q5VY43 1037 aaPredicted RBP12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 BRICD5Q6PL45 260 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 ZNF574Q6ZN55 896 aaPredicted RBP12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 HSD17B11Q8NBQ5 300 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 OR10G3Q8NGC4 313 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 ZNF160Q9HCG1 818 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 PISDQ9UG56 409 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 TRBV11-1A0A0K0K1C0 115 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 ANGPTL7O43827 346 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 EIF1BO60739 113 aaKnown RBP12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 OR5H8P0DN80 308 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 ZNF43P17038 809 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 EIF1P41567 113 aaKnown RBP12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 NHLH2Q02577 135 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 HMGN3Q15651 99 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 FAM69BQ5VUD6 431 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 NSUN5P2Q63ZY6 315 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 RPUSD3Q6P087 351 aaKnown RBP12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 C20orf196Q8IYI0 205 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 LRRC18Q8N456 261 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 PLPP5Q8NEB5 264 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 DYRK2Q92630 601 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 GNRHR2Q96P88 292 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 FGF21Q9NSA1 209 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 NXT1Q9UKK6 140 aaKnown RBP12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 PIGLQ9Y2B2 252 aa12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 EP300Q09472 2414 aaPredicted RBP12.32□□□□□ -0.44
CLCNKA-202ENST00000375692 A0A1W2PQM1 296 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 ZNF726A6NNF4 738 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 CLN5O75503 358 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 DBHP09172 617 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 OR5AC1P0C628 307 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 SULT1A1P50225 295 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 FXYD4P59646 89 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 CHAF1BQ13112 559 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 PHLDA2Q53GA4 152 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 PLXDC2Q6UX71 529 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 D2HGDHQ8N465 521 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 NFAM1Q8NET5 270 aaPredicted RBP12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 C19orf12Q9NSK7 152 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 METTL1Q9UBP6 276 aaKnown RBP12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 ZDHHC8Q9ULC8 765 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 FAM221AA4D161 298 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 DUX1O43812 170 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 IGHV2-5P01817 119 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 SUMO3P55854 103 aaPredicted RBP12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 TAF9Q16594 264 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 ZNF239Q16600 458 aaKnown RBP12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 TMEM176BQ3YBM2 270 aaPredicted RBP12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 NCMAPQ5T1S8 102 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 SLC23A3Q6PIS1 610 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 ANKRD37Q7Z713 158 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 SLC38A9Q8NBW4 561 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 NAXEQ8NCW5 288 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 OR52M1Q8NGK5 317 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 OR6X1Q8NH79 312 aa12.31□□□□□ -0.44
CLCNKA-202ENST00000375692 EDARADDQ8WWZ3 215 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms