RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 SOX3P41225 446 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 RAB8AP61006 207 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 DLK1P80370 383 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 PRR5P85299 388 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 RUNX1Q01196 453 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 MFGE8Q08431 387 aaPredicted RBP6.92□□□□□ -1.3
USP48-203ENST00000374732 IQCJQ1A5X6 159 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 RPEL1Q2QD12 228 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 GLCCI1Q86VQ1 547 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 GKN2Q86XP6 184 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 OR4A4PQ8NGN8 299 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 DUX3Q96PT4 197 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 TBX15Q96SF7 602 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 C20orf27Q9GZN8 174 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 PKIGQ9Y2B9 76 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 TRAV8-7A0A075B6U6 113 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 NTF3P20783 257 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 NME2P22392 152 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 RPS10P46783 165 aaKnown RBP6.92□□□□□ -1.3
USP48-203ENST00000374732 CX3CR1P49238 355 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 CSRP3P50461 194 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 CXCL17Q6UXB2 119 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 TMPRSS12Q86WS5 348 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 PNKDQ8N490 385 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 FAM24BQ8N5W8 94 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 OR4K5Q8NGD3 323 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 LINC00477Q96M19 166 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 ANAPC13Q9BS18 74 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 C1QTNF4Q9BXJ3 329 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 OR8D2Q9GZM6 311 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 MEPEQ9NQ76 525 aaPredicted RBP6.92□□□□□ -1.3
USP48-203ENST00000374732 LIN7CQ9NUP9 197 aaKnown RBP6.92□□□□□ -1.3
USP48-203ENST00000374732 TMEM30AQ9NV96 361 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 ASB6Q9NWX5 421 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 ASPDHA6ND91 283 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 SOCS2O14508 198 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 ZNF17P17021 662 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 IGFBP6P24592 240 aaPredicted RBP6.91□□□□□ -1.3
USP48-203ENST00000374732 CD40P25942 277 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 ZNF154Q13106 437 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 LINC01620Q4KN68 170 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 GLB1LQ6UWU2 654 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 SCCPDHQ8NBX0 429 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 OR11H7Q8NGC8 314 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 OR10S1Q8NGN2 331 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 OR5B3Q8NH48 314 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 TSLPQ969D9 159 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 CCDC115Q96NT0 180 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 SEPHS2Q99611 448 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 MACROD1Q9BQ69 325 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 GINS3Q9BRX5 216 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 SEC11CQ9BY50 192 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 SYT4Q9H2B2 425 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 RPS10P5Q9NQ39 176 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 SIGLEC9Q9Y336 463 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 A0A1W2PRS3 328 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 FAM90A10PA6NDY2 464 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 ZNF850A8MQ14 1090 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 INMT-MINDY4F8WBC2 141 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 DHHO43323 396 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 GKN3PP0CG01 181 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 RPL7P18124 248 aaKnown RBP6.91□□□□□ -1.3
USP48-203ENST00000374732 ARRB2P32121 409 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 MDH2P40926 338 aaKnown RBP6.91□□□□□ -1.3
USP48-203ENST00000374732 SLC6A9P48067 706 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 MVDP53602 400 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 RABGGTBP53611 331 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 TCTAP57738 103 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 ZXDAP98168 799 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 ZXDBP98169 803 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 HSD52Q0P140 79 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 AGERQ15109 404 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 KIAA1644Q3SXP7 199 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 TMEM78Q5T7P6 136 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 TMEM244Q5VVB8 128 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 TMEM215Q68D42 235 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 MEPCEQ7L2J0 689 aaKnown RBP6.91□□□□□ -1.3
USP48-203ENST00000374732 FAM126BQ8IXS8 530 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 CFAP52Q8N1V2 620 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 NPWQ8N729 165 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 ZNF485Q8NCK3 441 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 ZNF519Q8TB69 540 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 SKA2Q8WVK7 121 aaPredicted RBP6.91□□□□□ -1.3
USP48-203ENST00000374732 GRAMD2BQ96HH9 432 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 NSUN5Q96P11 429 aaKnown RBP6.91□□□□□ -1.3
USP48-203ENST00000374732 ZNF586Q9NXT0 402 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 PLXNA3P51805 1871 aa6.91□□□□□ -1.3
USP48-203ENST00000374732 A0A0G2JLM5 398 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 KIR2DS5A0A0G2JLQ3 304 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 A0A0G2JNG1 304 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 CASTOR2A6NHX0 329 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 PLPP1O14494 284 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 MAS1P04201 325 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 FGF3P11487 239 aaPredicted RBP6.9□□□□□ -1.3
USP48-203ENST00000374732 PGAM2P15259 253 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 CD33P20138 364 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 MAOAP21397 527 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 CMPK1P30085 196 aa6.9□□□□□ -1.3
USP48-203ENST00000374732 MAGEA5P43359 124 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms