RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 PIK3IP1Q96FE7 263 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 AKR1E2Q96JD6 320 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 OR8B2Q96RD0 313 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 RYDENQ9NUL5 291 aaKnown RBP13.02□□□□□ -0.33
NDC1-201ENST00000371429 IL17BQ9UHF5 180 aa13.02□□□□□ -0.33
NDC1-201ENST00000371429 MRM2Q9UI43 246 aaKnown RBP13.02□□□□□ -0.33
NDC1-201ENST00000371429 FFAR1O14842 300 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 OIP5O43482 229 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 BGLAPP02818 100 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 SSTP61278 116 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 TLE1Q04724 770 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 TMEM182Q6ZP80 229 aaPredicted RBP13.01□□□□□ -0.33
NDC1-201ENST00000371429 TMUB2Q71RG4 321 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 LYG2Q86SG7 212 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 ZFP62Q8NB50 900 aaPredicted RBP13.01□□□□□ -0.33
NDC1-201ENST00000371429 YIPF5Q969M3 257 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 TMEM56Q96MV1 263 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 TMEM38BQ9NVV0 291 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 TET1Q8NFU7 2136 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 WDR90Q96KV7 1748 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 TAAR5O14804 337 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 FCGR3BO75015 233 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 GABRB1P18505 474 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 RPL12P30050 165 aaKnown RBP13.01□□□□□ -0.33
NDC1-201ENST00000371429 PLPPR5Q32ZL2 321 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 C2orf50Q96LR7 162 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 PLEKHA2Q9HB19 425 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 RPS10-NUDT3A0A1W2PQS6 291 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 OR5H14A6NHG9 310 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 NTN1O95631 604 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 RPS10P46783 165 aaKnown RBP13.01□□□□□ -0.33
NDC1-201ENST00000371429 SSX2Q16385 188 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 KCNRGQ8N5I3 272 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 TMEM104Q8NE00 496 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 C17orf50Q8WW18 174 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 AMMECR1Q9Y4X0 333 aaPredicted RBP13.01□□□□□ -0.33
NDC1-201ENST00000371429 SBF2Q86WG5 1849 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 IGHV3-43A0A0B4J1X8 118 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 CDIPTO14735 213 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 IL5P05113 134 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 IGHV3-43DP0DP04 118 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 CALCRP30988 508 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 OR3A1P47881 315 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 ZNF528Q3MIS6 628 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 TMEM128Q5BJH2 165 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 ACY3Q96HD9 319 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 ZNF385AQ96PM9 386 aaKnown RBP13.01□□□□□ -0.33
NDC1-201ENST00000371429 MTCH1Q9NZJ7 389 aa13.01□□□□□ -0.33
NDC1-201ENST00000371429 ZNF230Q9UIE0 474 aaPredicted RBP13.01□□□□□ -0.33
NDC1-201ENST00000371429 DVL1O14640 695 aa13□□□□□ -0.33
NDC1-201ENST00000371429 DVL1P1P54792 670 aaPredicted RBP13□□□□□ -0.33
NDC1-201ENST00000371429 IGFBP7Q16270 282 aa13□□□□□ -0.33
NDC1-201ENST00000371429 SSX8Q7RTT4 187 aa13□□□□□ -0.33
NDC1-201ENST00000371429 TRAF3IP2O43734 574 aaPredicted RBP13□□□□□ -0.33
NDC1-201ENST00000371429 WISP3O95389 354 aaPredicted RBP13□□□□□ -0.33
NDC1-201ENST00000371429 GALP22466 123 aa13□□□□□ -0.33
NDC1-201ENST00000371429 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
NDC1-201ENST00000371429 MMP15P51511 669 aa13□□□□□ -0.33
NDC1-201ENST00000371429 ADIRFQ15847 76 aa13□□□□□ -0.33
NDC1-201ENST00000371429 Q3ZCU0 254 aa13□□□□□ -0.33
NDC1-201ENST00000371429 TSPO2Q5TGU0 170 aa13□□□□□ -0.33
NDC1-201ENST00000371429 PXT1Q8NFP0 134 aa13□□□□□ -0.33
NDC1-201ENST00000371429 CMTM3Q96MX0 182 aa13□□□□□ -0.33
NDC1-201ENST00000371429 RNF7Q9UBF6 113 aa13□□□□□ -0.33
NDC1-201ENST00000371429 TMEM272A0A1B0GTI8 110 aa13□□□□□ -0.33
NDC1-201ENST00000371429 OR2F2O95006 317 aa13□□□□□ -0.33
NDC1-201ENST00000371429 PNPP00491 289 aa13□□□□□ -0.33
NDC1-201ENST00000371429 SULT1A3P0DMM9 295 aa13□□□□□ -0.33
NDC1-201ENST00000371429 SULT1A4P0DMN0 295 aa13□□□□□ -0.33
NDC1-201ENST00000371429 OR2F1Q13607 317 aa13□□□□□ -0.33
NDC1-201ENST00000371429 INSL4Q14641 139 aa13□□□□□ -0.33
NDC1-201ENST00000371429 FAM214BQ7L5A3 538 aa13□□□□□ -0.33
NDC1-201ENST00000371429 MED30Q96HR3 178 aa13□□□□□ -0.33
NDC1-201ENST00000371429 ANGPTL4Q9BY76 406 aa13□□□□□ -0.33
NDC1-201ENST00000371429 MED9Q9NWA0 146 aa13□□□□□ -0.33
NDC1-201ENST00000371429 ZNF705FA8MVS1 300 aaPredicted RBP13□□□□□ -0.33
NDC1-201ENST00000371429 AHRRA9YTQ3 701 aa13□□□□□ -0.33
NDC1-201ENST00000371429 ZNF205O95201 554 aa13□□□□□ -0.33
NDC1-201ENST00000371429 ZNF705DP0CH99 300 aaPredicted RBP13□□□□□ -0.33
NDC1-201ENST00000371429 ZNF705BP0CI00 300 aaPredicted RBP13□□□□□ -0.33
NDC1-201ENST00000371429 ACOT7LQ6ZUV0 252 aa13□□□□□ -0.33
NDC1-201ENST00000371429 SLC25A40Q8TBP6 338 aa13□□□□□ -0.33
NDC1-201ENST00000371429 TGIF2Q9GZN2 237 aa13□□□□□ -0.33
NDC1-201ENST00000371429 CNTD2Q9H8S5 307 aa13□□□□□ -0.33
NDC1-201ENST00000371429 AK3Q9UIJ7 227 aa13□□□□□ -0.33
NDC1-201ENST00000371429 H3BP45 60 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 NGFRP08138 427 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 ACOT6Q3I5F7 207 aaPredicted RBP12.99□□□□□ -0.33
NDC1-201ENST00000371429 LCN15Q6UWW0 184 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 IL36GQ9NZH8 169 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 IGKV1D-16P01601 117 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 HMGN3Q15651 99 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 TIPARPQ7Z3E1 657 aaKnown RBP12.99□□□□□ -0.33
NDC1-201ENST00000371429 OR2T6Q8NHC8 308 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 SNRPGP15A8MWD9 76 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 IGHV3-13P01766 116 aa12.99□□□□□ -0.33
NDC1-201ENST00000371429 IGHV3-7P01780 117 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms