RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 C21orf140B9A014 251 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 IGHV4-34P06331 123 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 ST3GAL2Q16842 350 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 ACY3Q96HD9 319 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 RAB18Q9NP72 206 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 GLRX2Q9NS18 164 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 TCRBV16S1A1N1A0A5B0 115 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 TNFAIP6P98066 277 aaPredicted RBP17.43■□□□□ 0.38
LMO4-202ENST00000370544 PPP1R1AQ13522 171 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 CA5BP1Q8WTZ4 195 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 ESRP2Q9H6T0 727 aaKnown RBP17.43■□□□□ 0.38
LMO4-202ENST00000370544 CHEK1O14757 476 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 KCNJ3P48549 501 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 PLXNB2O15031 1838 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 CALCRP30988 508 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 MAGEA5P43359 124 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 TMEM211Q6ICI0 200 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 C10orf90Q96M02 699 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 PSG11Q9UQ72 335 aa17.43■□□□□ 0.38
LMO4-202ENST00000370544 MVDP53602 400 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 C11orf91Q3C1V1 193 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 OR10AD1Q8NGE0 317 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 BARX1Q9HBU1 254 aaPredicted RBP17.42■□□□□ 0.38
LMO4-202ENST00000370544 ICAM5Q9UMF0 924 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 OR5B21A6NL26 309 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 ADAM20O43506 726 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 SDHBP21912 280 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 AKR1C3P42330 323 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 DHRS2Q13268 280 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 HFEQ30201 348 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 LRRTM1Q86UE6 522 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 MUC20Q8N307 709 aaPredicted RBP17.42■□□□□ 0.38
LMO4-202ENST00000370544 NARFLQ9H6Q4 476 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 RFESDQ8TAC1 157 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 ZNF71Q9NQZ8 489 aaPredicted RBP17.42■□□□□ 0.38
LMO4-202ENST00000370544 ZNF835Q9Y2P0 537 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 TIMM9Q9Y5J7 89 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 NCBP2LA6PVI3 153 aaKnown RBP17.42■□□□□ 0.38
LMO4-202ENST00000370544 PATE3B3GLJ2 98 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 WISP3O95389 354 aaPredicted RBP17.42■□□□□ 0.38
LMO4-202ENST00000370544 TEX261Q6UWH6 196 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 CXXC4Q9H2H0 198 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 U3KQ87 197 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 C3orf85A0A1B0GTC6 90 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 OGG1O15527 345 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 FCGR3BO75015 233 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 LYG1Q8N1E2 194 aa17.42■□□□□ 0.38
LMO4-202ENST00000370544 CNTRLQ7Z7A1 2325 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 LPAR6P43657 344 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 LSM6P62312 80 aaKnown RBP17.41■□□□□ 0.38
LMO4-202ENST00000370544 TUSC5Q8IXB3 177 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 C10orf111Q8N326 155 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 SLC35D1Q9NTN3 355 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 MPC1Q9Y5U8 109 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 ADAM10O14672 748 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 GAB4Q2WGN9 574 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 OR5M8Q8NGP6 311 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 CCL17Q92583 94 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 ZDHHC16Q969W1 377 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 TRIP11Q15643 1979 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 C9orf170A2RU37 121 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 CCL3P10147 92 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 TMEM267Q0VDI3 215 aaPredicted RBP17.41■□□□□ 0.38
LMO4-202ENST00000370544 C3AR1Q16581 482 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 HRASP01112 189 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 PGA3P0DJD8 388 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 ZNF705AQ6ZN79 300 aaPredicted RBP17.41■□□□□ 0.38
LMO4-202ENST00000370544 C9orf40Q8IXQ3 194 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 C2CD4CQ8TF44 421 aa17.41■□□□□ 0.38
LMO4-202ENST00000370544 RYDENQ9NUL5 291 aaKnown RBP17.41■□□□□ 0.38
LMO4-202ENST00000370544 KNL1Q8NG31 2342 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 DOCK5Q9H7D0 1870 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 CYTIPO60759 359 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 ACTL6AO96019 429 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 SELENOPP49908 381 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 RAB7AP51149 207 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 RPL7L1Q6DKI1 246 aaKnown RBP17.4■□□□□ 0.38
LMO4-202ENST00000370544 PIK3IP1Q96FE7 263 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 PECRQ9BY49 303 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 FRRS1LQ9P0K9 344 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 IGHA1P01876 353 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 GABRA1P14867 456 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 RAG2P55895 527 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 Q3ZCU0 254 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 NCR3LG1Q68D85 454 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 BHLHA15Q7RTS1 189 aaPredicted RBP17.4■□□□□ 0.38
LMO4-202ENST00000370544 TMEM56Q96MV1 263 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 SHANK3Q9BYB0 1731 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 MEX3AA1L020 520 aaKnown RBP17.4■□□□□ 0.38
LMO4-202ENST00000370544 FOXS1O43638 330 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 PRSS12P56730 875 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 ZNF770Q6IQ21 691 aaPredicted RBP17.4■□□□□ 0.38
LMO4-202ENST00000370544 TMEM52Q8NDY8 209 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 OR5D13Q8NGL4 314 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 RBM38Q9H0Z9 239 aaKnown RBP17.4■□□□□ 0.38
LMO4-202ENST00000370544 KCNK15Q9H427 330 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 NAA60Q9H7X0 242 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 AMDHD2Q9Y303 409 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 CST2P09228 141 aa17.4■□□□□ 0.38
LMO4-202ENST00000370544 ZBTB37Q5TC79 503 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms