RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SBK3P0C264 359 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 TCL1AP56279 114 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 FAM53BQ14153 422 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 SLC35E4Q6ICL7 350 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 ZNF574Q6ZN55 896 aaPredicted RBP16.18■□□□□ 0.18
SNX27-202ENST00000368841 LINC00052Q96N35 136 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 HLXQ14774 488 aaPredicted RBP16.18■□□□□ 0.18
SNX27-202ENST00000368841 TMEM140Q9NV12 185 aa16.18■□□□□ 0.18
SNX27-202ENST00000368841 SNRPCP09234 159 aaKnown RBP16.17■□□□□ 0.18
SNX27-202ENST00000368841 GNG4P50150 75 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 DYRK2Q92630 601 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 C12orf57Q99622 126 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 MYH14Q7Z406 1995 aaKnown RBP16.17■□□□□ 0.18
SNX27-202ENST00000368841 ITGB4P16144 1822 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 OR5AC1P0C628 307 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 RAB5AP20339 215 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 GNG3P63215 75 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 BAP18Q8IXM2 172 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 OR4C5Q8NGB2 326 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 C4orf45Q96LM5 186 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 SIRT5Q9NXA8 310 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 NRAPQ86VF7 1730 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 PWWP2BQ6NUJ5 590 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 IL36GQ9NZH8 169 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 CACNG5Q9UF02 275 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 LIPGQ9Y5X9 500 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 CD1BP29016 333 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 MAGEA5P43359 124 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 OR3A1P47881 315 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 KLF3P57682 345 aaPredicted RBP16.17■□□□□ 0.18
SNX27-202ENST00000368841 FOXL2P58012 376 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 ETV3LQ6ZN32 361 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 GTF2H5Q6ZYL4 71 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 BHLHA15Q7RTS1 189 aaPredicted RBP16.17■□□□□ 0.18
SNX27-202ENST00000368841 OR5C1Q8NGR4 320 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 GSX2Q9BZM3 304 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 GEMIN2O14893 280 aaKnown RBP16.17■□□□□ 0.18
SNX27-202ENST00000368841 CT62P0C5K7 136 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 CSF2RBP32927 897 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 ZNF385DQ9H6B1 395 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 RNASEK-C17orf49H0YIS7 233 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 TPBGQ13641 420 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 ACER2Q5QJU3 275 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 FAM109BQ6ICB4 259 aaPredicted RBP16.17■□□□□ 0.18
SNX27-202ENST00000368841 C11orf87Q6NUJ2 197 aa16.17■□□□□ 0.18
SNX27-202ENST00000368841 TMEM18Q96B42 140 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 TMEM56Q96MV1 263 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 SIRT3Q9NTG7 399 aaPredicted RBP16.16■□□□□ 0.18
SNX27-202ENST00000368841 A0A1B0GUH1 482 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 SP1P08047 785 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 FUT3P21217 361 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 ACVR1Q04771 509 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 ZG16BQ96DA0 208 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 OR2A2Q6IF42 318 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 PTPMT1Q8WUK0 201 aaPredicted RBP16.16■□□□□ 0.18
SNX27-202ENST00000368841 AP5S1Q9NUS5 200 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 ZNF737O75373 536 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 THSD4Q6ZMP0 1018 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 SYS1Q8N2H4 156 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 HSBP1O75506 76 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 IGLV3-25P01717 112 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 PTBP1P26599 531 aaKnown RBP eCLIP16.16■□□□□ 0.183e-8■■■■■ 79.7
SNX27-202ENST00000368841 HTR1DP28221 377 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 PJVKQ0ZLH3 352 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 TUSC5Q8IXB3 177 aa16.16■□□□□ 0.18
SNX27-202ENST00000368841 PRICKLE4Q2TBC4 344 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 TIPARPQ7Z3E1 657 aaKnown RBP16.15■□□□□ 0.18
SNX27-202ENST00000368841 IL22RA2Q969J5 263 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 WDR61Q9GZS3 305 aaKnown RBP16.15■□□□□ 0.18
SNX27-202ENST00000368841 CNTD2Q9H8S5 307 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 IL21Q9HBE4 155 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 TRAV39A0A0B4J263 110 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 PNLIPP16233 465 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 ITGBL1O95965 494 aaPredicted RBP16.15■□□□□ 0.18
SNX27-202ENST00000368841 ZNF66Q6ZN08 573 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 ABI3BPQ7Z7G0 1075 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 PRDM7Q9NQW5 492 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 ANKRD34CP0C6C1 535 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 DYNLT3P51808 116 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 CALHM3Q86XJ0 350 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 TCTE3Q8IZS6 198 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 DUSP18Q8NEJ0 188 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 PRSS3P2Q8NHM4 247 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 PLCH1Q4KWH8 1693 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 EPPINO95925 133 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 FZD6O60353 706 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 LIMS3P0CW19 117 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 LIMS4P0CW20 117 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 PTGFRP43088 359 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 PPP1R1AQ13522 171 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 ST3GAL2Q16842 350 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 UQCC1Q9NVA1 299 aa16.15■□□□□ 0.18
SNX27-202ENST00000368841 A0A1W2PPE3 182 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 CD96P40200 585 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 ZNF141Q15928 474 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 NKG7Q16617 165 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 LINC01555Q8NAE3 123 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 MVB12AQ96EY5 273 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 DNAJB12Q9NXW2 375 aaKnown RBP16.14■□□□□ 0.17
SNX27-202ENST00000368841 IGHA1P01876 353 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms