RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 DIABLOQ9NR28 239 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 PTTG3PQ9NZH4 202 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 ATPIF1Q9UII2 106 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 hCG_38984A0A1B0GV85 526 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 FAM240BA0A1B0GVZ2 78 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 MEIOCA2RUB1 952 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 GGT3PA6NGU5 568 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 CTDSPLO15194 276 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 XRCC3O43542 346 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 GSTZ1O43708 216 aaPredicted RBP8.49□□□□□ -1.05
TPM3-210ENST00000368530 BPNT1O95861 308 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 APLNRP35414 380 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 GDNFP39905 211 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 FABP6P51161 128 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 EFNA4P52798 201 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 GPR176Q14439 515 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 SWI5Q1ZZU3 235 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 SLC22A25Q6T423 547 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 ZNF584Q8IVC4 421 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 CADM3Q8N126 398 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 FBXL14Q8N1E6 418 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 TOMM5Q8N4H5 51 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 PAQR4Q8N4S7 273 aaPredicted RBP8.49□□□□□ -1.05
TPM3-210ENST00000368530 CCDC54Q8NEL0 328 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 SMIM4Q8WVI0 70 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 FCAMRQ8WWV6 532 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 PP6455Q8WZ26 134 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 FAM168AQ92567 244 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 RNF170Q96K19 258 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 C1QTNF6Q9BXI9 259 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 C1QTNF5Q9BXJ0 243 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 CHST5Q9GZS9 411 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 POFUT1Q9H488 388 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 RABL2AQ9UBK7 228 aaPredicted RBP8.49□□□□□ -1.05
TPM3-210ENST00000368530 RABL2BQ9UNT1 228 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 CACNG2Q9Y698 323 aa8.49□□□□□ -1.05
TPM3-210ENST00000368530 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.48□□□□□ -1.058e-7■■■■□ 20.9
TPM3-210ENST00000368530 FAM230AA0A1W2PPH8 454 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 MEIS3P1A6NDR6 274 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 LDLRAD4O15165 306 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 XRCC2O43543 280 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 NGFP01138 241 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 FCER2P06734 321 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 CELA3BP08861 270 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 VSIG8P0DPA2 414 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 COX5BP10606 129 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 ZNF16P17020 682 aaPredicted RBP8.48□□□□□ -1.05
TPM3-210ENST00000368530 USF1P22415 310 aaPredicted RBP8.48□□□□□ -1.05
TPM3-210ENST00000368530 FAM3AP98173 230 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 TGFBR3Q03167 851 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 UNC119Q13432 240 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 HLXQ14774 488 aaPredicted RBP8.48□□□□□ -1.05
TPM3-210ENST00000368530 KISS1Q15726 138 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 MOGAT2Q3SYC2 334 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 Q6ZSR3 168 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 MOB3CQ70IA8 216 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 UTS2BQ765I0 119 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 DPPA2Q7Z7J5 298 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 PNLDC1Q8NA58 520 aaKnown RBP8.48□□□□□ -1.05
TPM3-210ENST00000368530 CMBLQ96DG6 245 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 POM121L2Q96KW2 1035 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 C19orf24Q9BVV8 132 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 RGCCQ9H4X1 137 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 BANF2Q9H503 90 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 RBFOX1Q9NWB1 397 aaKnown RBP8.48□□□□□ -1.05
TPM3-210ENST00000368530 NLKQ9UBE8 527 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 LPAR3Q9UBY5 353 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 RAB22AQ9UL26 194 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 ING4Q9UNL4 249 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 STARD10Q9Y365 291 aa8.48□□□□□ -1.05
TPM3-210ENST00000368530 A0A1W2PP11 408 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 GABARAPH6UMI1 98 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 M0R1B8 84 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 ORC5O43913 435 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 CRTAPO75718 401 aaPredicted RBP8.47□□□□□ -1.05
TPM3-210ENST00000368530 MPIG6BO95866 241 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 PLATP00750 562 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 MT-ND4P03905 459 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 ALDOBP05062 364 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 RAB6AP20340 208 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 APOBEC3AP31941 199 aaPredicted RBP8.47□□□□□ -1.05
TPM3-210ENST00000368530 MNDAP41218 407 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 WNT5AP41221 380 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 IDH3GP51553 393 aaPredicted RBP8.47□□□□□ -1.05
TPM3-210ENST00000368530 QRFPP83859 136 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 MALLQ13021 153 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 HACD4Q5VWC8 232 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 RSBN1Q5VWQ0 802 aaPredicted RBP8.47□□□□□ -1.05
TPM3-210ENST00000368530 COLCA1Q6ZS62 124 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 MRPL21Q7Z2W9 205 aaKnown RBP8.47□□□□□ -1.05
TPM3-210ENST00000368530 MYPOPQ86VE0 399 aaPredicted RBP8.47□□□□□ -1.05
TPM3-210ENST00000368530 CHST4Q8NCG5 386 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 SLC30A7Q8NEW0 376 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 OR56B2PQ8NGI1 322 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 OR10K1Q8NGX5 313 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 TNFAIP8L1Q8WVP5 186 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 PIGCQ92535 297 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 APOBEC3DQ96AK3 386 aaPredicted RBP8.47□□□□□ -1.05
TPM3-210ENST00000368530 C10orf35Q96D05 121 aa8.47□□□□□ -1.05
TPM3-210ENST00000368530 MSI2Q96DH6 328 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms