RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 SPEM2Q0P670 501 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 SMAD4Q13485 552 aaKnown RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 ACER2Q5QJU3 275 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 OR52M1Q8NGK5 317 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 OR2G3Q8NGZ4 309 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 RNASE11Q8TAA1 199 aaKnown RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 CDCA3Q99618 268 aaPredicted RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 PLA2G2EQ9NZK7 142 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 B3GAT1Q9P2W7 334 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 SLC7A11Q9UPY5 501 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 NCOA6Q14686 2063 aaPredicted RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 C5orf52A6NGY3 159 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 H3BMH7 237 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 M0R135 149 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 ST8SIA3O43173 380 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 EFNA2O43921 213 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 CLN5O75503 358 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 CST7O76096 145 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 OR7C1O76099 320 aaPredicted RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 PATE4P0C8F1 98 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 PGA4P0DJD7 388 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 PGA3P0DJD8 388 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 CCNOP22674 350 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 TAGLN2P37802 199 aaKnown RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 CCR5P51681 352 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 UBE2KP61086 200 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 GRB2P62993 217 aaKnown RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 HNF4GQ14541 408 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 HIST2H3AQ71DI3 136 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 OIT3Q8WWZ8 545 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 MVB12AQ96EY5 273 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 BORCS8Q96FH0 119 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 ZNF799Q96GE5 643 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 C1orf147Q96MC9 270 aaPredicted RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 PIGQQ9BRB3 760 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 DEFB126Q9BYW3 111 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 PLEKHA2Q9HB19 425 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 ANXA10Q9UJ72 324 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 UBE2J1Q9Y385 318 aaPredicted RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 NSG1A0A0A6YYJ2 146 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 FAM24AA6NFZ4 105 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 ZNF17P17021 662 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 S100PP25815 95 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 GNRHRP30968 328 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 EIF2S3P41091 472 aaKnown RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 AFF3P51826 1226 aaKnown RBP7.17□□□□□ -1.26
CD46-208ENST00000367042 ZP4Q12836 540 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 C4orf17Q53FE4 359 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 TMEM268Q5VZI3 342 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 LHFPL1Q86WI0 220 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 OR14K1Q8NGZ2 314 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 METTL9Q9H1A3 318 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 SLC35B3Q9H1N7 401 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 NELFAQ9H3P2 528 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 NECAP2Q9NVZ3 263 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 AK3Q9UIJ7 227 aa7.17□□□□□ -1.26
CD46-208ENST00000367042 IGHV1OR21-1A0A087WYE8 117 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 AP4M1O00189 453 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 ATXN7O15265 892 aaPredicted RBP7.16□□□□□ -1.26
CD46-208ENST00000367042 ZNHIT1O43257 154 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 SSSCA1O60232 199 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 DHRS3O75911 302 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 SPINK2P20155 84 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 RHEBQ15382 184 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 RNF212Q495C1 297 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 TMEM156Q8N614 296 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 GJC3Q8NFK1 279 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 SHDQ96IW2 340 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 OR6C1Q96RD1 312 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 SYT3Q9BQG1 590 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 CELSR3Q9NYQ7 3312 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 H3BP45 60 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 TRAF3IP2O43734 574 aaPredicted RBP7.16□□□□□ -1.26
CD46-208ENST00000367042 FBP1P09467 338 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 RPS2P15880 293 aaKnown RBP7.16□□□□□ -1.26
CD46-208ENST00000367042 EPHA1P21709 976 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 MSR1P21757 451 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 RAB5CP51148 216 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 FAM3AP98173 230 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 PIGYQ3MUY2 71 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 ZNF695Q8IW36 515 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 LINC00469Q8N7U9 141 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 ULBP2Q9BZM5 246 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 TWSG1Q9GZX9 223 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 TOLLIPQ9H0E2 274 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 C8orf33Q9H7E9 229 aaPredicted RBP7.16□□□□□ -1.26
CD46-208ENST00000367042 TIMM10BQ9Y5J6 103 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 GEMIN2O14893 280 aaKnown RBP7.16□□□□□ -1.26
CD46-208ENST00000367042 CTSDP07339 412 aaPredicted RBP7.16□□□□□ -1.26
CD46-208ENST00000367042 DUSP1P28562 367 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 ARL6IP1Q15041 203 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 NKAIN1Q4KMZ8 207 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 ZNF343Q6P1L6 599 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 C17orf78Q8N4C9 275 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 UBAC2Q8NBM4 344 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 OR5L2Q8NGL0 311 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 PIGCQ92535 297 aa7.16□□□□□ -1.26
CD46-208ENST00000367042 MRPL38Q96DV4 380 aaKnown RBP7.16□□□□□ -1.26
CD46-208ENST00000367042 MRGPRX4Q96LA9 322 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms