RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 MAGOHP61326 146 aaKnown RBP6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 SELENOWP63302 87 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 SLC35F1Q5T1Q4 408 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 PLBD1Q6P4A8 553 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 SMARCD3Q6STE5 483 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 PIGWQ7Z7B1 504 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 IQCF2Q8IXL9 164 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 ZNF561Q8N587 486 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 OR4Q3Q8NH05 313 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 PIGCQ92535 297 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 TLCD1Q96CP7 247 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 CDRT15Q96T59 188 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 CCDC28BQ9BUN5 200 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 C1orf21Q9H246 121 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 DNAJC27Q9NZQ0 273 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 KIAA1456Q9P272 454 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 KCNG2Q9UJ96 466 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 MPC1Q9Y5U8 109 aa6.62□□□□□ -1.35
HMGB1P39-201ENST00000366304 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 hCG_1809904A0A1W2PP81 198 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 A0A1W2PPE2 198 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 A0A1W2PPH5 198 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 A0A1W2PR64 198 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 A0A1W2PRV1 198 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 ANXA2P2A6NMY6 339 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 ZNF732B4DXR9 585 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 NDUFAB1O14561 156 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 ANGPT2O15123 496 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 ARPC3O15145 178 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 ZNF737O75373 536 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 DNAJC8O75937 253 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 RENP00797 406 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 RBP4P02753 201 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 SPARCP09486 303 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 SPNP16150 400 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 MYF6P23409 242 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 GDNFP39905 211 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 SLC7A2P52569 658 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 FHL3Q13643 280 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 EIF2B1Q14232 305 aaKnown RBP6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 KIR2DS1Q14954 304 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 CEP78Q5JTW2 689 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 CPLX4Q7Z7G2 160 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 CSNK2A3Q8NEV1 391 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 AKR1E2Q96JD6 320 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 ATP6V1G3Q96LB4 118 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 ARPC5LQ9BPX5 153 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 TMEM120AQ9BXJ8 343 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 VCXQ9H320 206 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 NKIRAS1Q9NYS0 192 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 PAIP2BQ9ULR5 123 aaKnown RBP6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 TMEM5Q9Y2B1 443 aa6.61□□□□□ -1.35
HMGB1P39-201ENST00000366304 SORL1Q92673 2214 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 FAM172BPA6NC97 362 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 ZNF878C9JN71 531 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 F8VVB4 439 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 F8VWA3 439 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 LY6LH3BQJ8 138 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 K7N7A8 449 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 SLC1A7O00341 560 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 ZNF593O00488 134 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 GYPBP06028 91 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 HTR1DP28221 377 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 TAF13Q15543 124 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 SNAPC1Q16533 368 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 FAM53AQ6NSI3 398 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 HAGHLQ6PII5 290 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 ANKRD13BQ86YJ7 626 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 ZDHHC23Q8IYP9 409 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 Q8N1Y9 231 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 TPRX1Q8N7U7 411 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 C5orf56Q8N8D9 126 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 POC1AQ8NBT0 407 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 OR8U1Q8NH10 309 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 FANK1Q8TC84 345 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 CHPT1Q8WUD6 406 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 DYDC1Q8WWB3 177 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 LINC00476Q8WZB0 136 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 STMN2Q93045 179 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 RNFT2Q96EX2 444 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 CLEC7AQ9BXN2 247 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 TMEM133Q9H2Q1 129 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 OR52D1Q9H346 318 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 HES4Q9HCC6 221 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 RASL12Q9NYN1 266 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 DPM3Q9P2X0 92 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 SESN1Q9Y6P5 492 aa6.6□□□□□ -1.35
HMGB1P39-201ENST00000366304 A0A1W2PRQ8 180 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 TMEM82A0PJX8 343 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 SERPINE3A8MV23 424 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 LDLRAD4O15165 306 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 DIRAS1O95057 198 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 IFNA14P01570 189 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 IGLV1-47P01700 117 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 CLUP10909 449 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 EDDM3BP56851 147 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 GNG3P63215 75 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 DGCR6Q14129 220 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 SMIM21Q3B7S5 101 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms