RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ZFP82Q8N141 532 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 LINC00337Q8N6G1 96 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 ZNF555Q8NEP9 628 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 C9orf72Q96LT7 481 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 OPALINQ96PE5 141 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 OR51B5Q9H339 312 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 MRPL16Q9NX20 251 aaKnown RBP1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 ADA2Q9NZK5 511 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 TBC1D24Q9ULP9 559 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 DDX19BQ9UMR2 479 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 ADAMTS7Q9UKP4 1686 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 SHANK3Q9BYB0 1731 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 TRAV8-4A0A0B4J246 113 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 A0A1B0GU33 70 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 HACD1B0YJ81 288 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 G3V3Q6 166 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 RGS5O15539 181 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 SMC2O95347 1197 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 P01737 135 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 ARL2P36404 184 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 SLC18A1P54219 525 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 FOXF1Q12946 379 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 PMVKQ15126 192 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 ZNF322Q6U7Q0 402 aaPredicted RBP1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 FAM231DQ6ZW35 169 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 OFCC1Q8IZS5 231 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 BBS5Q8N3I7 341 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 RPRMLQ8N4K4 120 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 RNASE11Q8TAA1 199 aaKnown RBP1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 LMX1AQ8TE12 382 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 C11orf70Q9BRQ4 267 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 GABARAPL1Q9H0R8 117 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 DEFB129Q9H1M3 183 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 TXNIPQ9H3M7 391 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 ZC4H2Q9NQZ6 224 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 PXMP2Q9NR77 195 aa1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 ZNF706Q9Y5V0 76 aaPredicted RBP1.29□□□□□ -2.2
RNU4-28P-201ENST00000364739 KMT2BQ9UMN6 2715 aaPredicted RBP1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 PSIP1O75475 530 aaKnown RBP1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 RHOCP08134 193 aa1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 PTHLHP12272 177 aa1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 ZNF22P17026 224 aaPredicted RBP1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 COILP38432 576 aaPredicted RBP1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 RAB11AP62491 216 aa1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 RPL10AP62906 217 aaKnown RBP1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 CLEC18BQ6UXF7 455 aa1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 VTCN1Q7Z7D3 282 aa1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 TRAM1L1Q8N609 369 aa1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 TSEN15Q8WW01 171 aaKnown RBP1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 APOBEC3DQ96AK3 386 aaPredicted RBP1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 RAD51AP1Q96B01 352 aa1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 SPACA5Q96QH8 159 aa1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 SRRQ9GZT4 340 aa1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 PORCNQ9H237 461 aa1.28□□□□□ -2.2
RNU4-28P-201ENST00000364739 TRPM6Q9BX84 2022 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 LAMB2P55268 1798 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 IGKV1D-37A0A075B6S9 117 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 C9JQL5 133 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 H3BMM0 161 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 K7ERS5 55 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 TRDMT1O14717 391 aaKnown RBP1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 SLC31A1O15431 190 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 OR2A4O95047 310 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 GFAPP14136 432 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 CRABP2P29373 138 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 RPS5P46782 204 aaKnown RBP1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 PSMB2P49721 201 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 LAMTOR4Q0VGL1 99 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 TMEM241Q24JQ0 296 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 BEX5Q5H9J7 111 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 CYP4Z2PQ8N1L4 340 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 BPIFB6Q8NFQ5 453 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 OR4K2Q8NGD2 314 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 UBE2WQ96B02 151 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 SMIM8Q96KF7 97 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 OR2A7Q96R45 310 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 TUBA4BQ9H853 241 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 PRSS16Q9NQE7 514 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 AHSPQ9NZD4 102 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 TAC3Q9UHF0 121 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 ORC6Q9Y5N6 252 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 U3KQK5 164 aa1.27□□□□□ -2.21
RNU4-28P-201ENST00000364739 PLEKHG2Q9H7P9 1386 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 MED13Q9UHV7 2174 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 CTAGE15A4D2H0 777 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 GMNCA6NCL1 334 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 LRRIQ4A6NIV6 560 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 H3BN98 237 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 CGB3P0DN86 165 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 CGB7P0DN87 165 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 GZMAP12544 262 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 IDI1Q13907 227 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 CTAGE6Q86UF2 777 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 C3orf22Q8N5N4 141 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 INO80EQ8NBZ0 244 aaPredicted RBP1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 OR10Z1Q8NGY1 313 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 BAALCQ8WXS3 180 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 TMEM234Q8WY98 164 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 ISOC2Q96AB3 205 aa1.26□□□□□ -2.21
RNU4-28P-201ENST00000364739 OR8B2Q96RD0 313 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms