RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 OR2F1Q13607 317 aa16.44■□□□□ 0.22
CLIP2-202ENST00000361545 SNTB1Q13884 538 aaKnown RBP16.44■□□□□ 0.22
CLIP2-202ENST00000361545 Q3ZCU0 254 aa16.44■□□□□ 0.22
CLIP2-202ENST00000361545 NRXN2Q9P2S2 1712 aa16.44■□□□□ 0.22
CLIP2-202ENST00000361545 ATP6V1G2-DDX39BF2Z307 99 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 HNF1AP20823 631 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 MPGP29372 298 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 RTP5Q14D33 572 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 ARRDC1Q8N5I2 433 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 MARC2Q969Z3 335 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 PATZ1Q9HBE1 687 aaKnown RBP16.43■□□□□ 0.22
CLIP2-202ENST00000361545 GPR35Q9HC97 309 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 SLC25A6P12236 298 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 HMGN3Q15651 99 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 ZNF75AQ96N20 296 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 hADV38S2A0JD32 116 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 TAAR5O14804 337 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 FOXB2Q5VYV0 432 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 BPIFCQ8NFQ6 507 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 LHX4Q969G2 390 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 BARX1Q9HBU1 254 aaPredicted RBP16.43■□□□□ 0.22
CLIP2-202ENST00000361545 CES1P1Q9UKY3 287 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 LRRC37AA6NMS7 1700 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 GVINP1Q7Z2Y8 2422 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 CENPVL1A0A0U1RR11 272 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 A0A1B0GUH1 482 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 OR5B21A6NL26 309 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 PYCARD-AS1I3L0S3 204 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 GP1BAP07359 652 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 CYC1P08574 325 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 BPIFB3P59826 476 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 OXA1LQ15070 435 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 SOX7Q9BT81 388 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 GAL3ST2Q9H3Q3 398 aa16.43■□□□□ 0.22
CLIP2-202ENST00000361545 CRYBB2P43320 205 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 ASCL1P50553 236 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 SSBP1Q04837 148 aaKnown RBP16.42■□□□□ 0.22
CLIP2-202ENST00000361545 TMEM128Q5BJH2 165 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 RCL1Q9Y2P8 373 aaKnown RBP16.42■□□□□ 0.22
CLIP2-202ENST00000361545 MPC1Q9Y5U8 109 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 URGCP-MRPS24S4R325 110 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 PCM1Q15154 2024 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 LALBAP00709 142 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 FGF9P31371 208 aaPredicted RBP16.42■□□□□ 0.22
CLIP2-202ENST00000361545 OR3A1P47881 315 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 MOB1BQ7L9L4 216 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 OR10AC1Q8NH08 325 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 SAP30LQ9HAJ7 183 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 IL5P05113 134 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 TAGLNQ01995 201 aaKnown RBP16.42■□□□□ 0.22
CLIP2-202ENST00000361545 MOGAT3Q86VF5 341 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 PPP1R1CQ8WVI7 109 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 ADGRG7Q96K78 797 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 C16orf97H3BN30 126 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 PDCD6O75340 191 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 CLDN20P56880 219 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 FOXO1Q12778 655 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 ACOT6Q3I5F7 207 aaPredicted RBP16.42■□□□□ 0.22
CLIP2-202ENST00000361545 CREB3L2Q70SY1 520 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 OR5D13Q8NGL4 314 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 OR4F5Q8NH21 305 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 PTP4A1Q93096 173 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 OR4F4Q96R69 305 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 PLEKHA2Q9HB19 425 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 CYSLTR2Q9NS75 346 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 OR5V1Q9UGF6 321 aa16.42■□□□□ 0.22
CLIP2-202ENST00000361545 CDIPTO14735 213 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 CST7O76096 145 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 C1QBP02746 253 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 LSM11P83369 360 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLIP2-202ENST00000361545 SSX1Q16384 188 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 BTNL3Q6UXE8 466 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 ACTR3CQ9C0K3 210 aaPredicted RBP16.41■□□□□ 0.22
CLIP2-202ENST00000361545 ATXN7O15265 892 aaPredicted RBP16.41■□□□□ 0.22
CLIP2-202ENST00000361545 LSM6P62312 80 aaKnown RBP16.41■□□□□ 0.22
CLIP2-202ENST00000361545 MASP2O00187 686 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 SULT1A3P0DMM9 295 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 SULT1A4P0DMN0 295 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 TVP23CQ96ET8 276 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 FAM157AC9JC47 383 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 COX7A2P2O60397 106 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 TMEM127O75204 238 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 IGKV1D-16P01601 117 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 TGM1P22735 817 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 CSF2RBP32927 897 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 DBX2Q6ZNG2 339 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 ZNF439Q8NDP4 499 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 OR2H1Q9GZK4 316 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 KCNK15Q9H427 330 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 ZNF835Q9Y2P0 537 aa16.41■□□□□ 0.22
CLIP2-202ENST00000361545 CST2P09228 141 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 ZNF385AQ96PM9 386 aaKnown RBP16.4■□□□□ 0.22
CLIP2-202ENST00000361545 OR2D2Q9H210 308 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 ARFGEF1Q9Y6D6 1849 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 IGHV1-45A0A0A0MS14 117 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 LFNGQ8NES3 379 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 DNASE2BQ8WZ79 361 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 TDRD15B5MCY1 1934 aaKnown RBP16.4■□□□□ 0.22
CLIP2-202ENST00000361545 TRAV38-1A0A0B4J264 116 aa16.4■□□□□ 0.22
CLIP2-202ENST00000361545 SNRPGP15A8MWD9 76 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms