RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ZNF705BP0CI00 300 aaPredicted RBP11.91□□□□□ -0.5
LDB3-202ENST00000361373 RAB4AP20338 218 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 CEACAM6P40199 344 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 CD96P40200 585 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 ACAA2P42765 397 aaKnown RBP11.91□□□□□ -0.5
LDB3-202ENST00000361373 FLI1Q01543 452 aaPredicted RBP11.91□□□□□ -0.5
LDB3-202ENST00000361373 TMEM182Q6ZP80 229 aaPredicted RBP11.91□□□□□ -0.5
LDB3-202ENST00000361373 FYTTD1Q96QD9 318 aaKnown RBP11.91□□□□□ -0.5
LDB3-202ENST00000361373 NUP214P35658 2090 aaPredicted RBP11.91□□□□□ -0.5
LDB3-202ENST00000361373 GZMMP51124 257 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 P2RY6Q15077 328 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 GLDNQ6ZMI3 551 aaPredicted RBP11.91□□□□□ -0.5
LDB3-202ENST00000361373 C17orf107Q6ZR85 190 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 SLC7A5P1Q8MH63 180 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 RBPMSQ93062 196 aaKnown RBP11.91□□□□□ -0.5
LDB3-202ENST00000361373 AKR1E2Q96JD6 320 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 ONECUT1Q9UBC0 465 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 ZNFX1Q9P2E3 1918 aaKnown RBP11.91□□□□□ -0.5
LDB3-202ENST00000361373 C20orf202A1L168 122 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 ZNF724A8MTY0 619 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 MPZL1O95297 269 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 BTNL3Q6UXE8 466 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 RNF32Q9H0A6 362 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 TUBG2Q9NRH3 451 aa11.91□□□□□ -0.5
LDB3-202ENST00000361373 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.91□□□□□ -0.5
LDB3-202ENST00000361373 PARP14Q460N5 1801 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 AHRRA9YTQ3 701 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 UMAD1C9J7I0 102 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 CDX4O14627 284 aaPredicted RBP11.9□□□□□ -0.5
LDB3-202ENST00000361373 FBP1P09467 338 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 MGST1P10620 155 aaKnown RBP11.9□□□□□ -0.5
LDB3-202ENST00000361373 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 SURF2Q15527 256 aaPredicted RBP11.9□□□□□ -0.5
LDB3-202ENST00000361373 ADIRFQ15847 76 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 ETFRF1Q6IPR1 90 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 HIST2H3AQ71DI3 136 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 PPP1R1CQ8WVI7 109 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 RAB40CQ96S21 281 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 RAB18Q9NP72 206 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 ERRFI1Q9UJM3 462 aaPredicted RBP11.9□□□□□ -0.5
LDB3-202ENST00000361373 SMLR1H3BR10 107 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 J3QT63 122 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 TSPAN2O60636 221 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 B3GALNT1O75752 331 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 METTL15P1P0C7V9 234 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 STUMQ69YW2 141 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 OR10V1Q8NGI7 309 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 NTNG2Q96CW9 530 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 TINAGL1Q9GZM7 467 aaPredicted RBP11.9□□□□□ -0.5
LDB3-202ENST00000361373 CNTD2Q9H8S5 307 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 PATZ1Q9HBE1 687 aaKnown RBP11.9□□□□□ -0.5
LDB3-202ENST00000361373 DOCK3Q8IZD9 2030 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 TUBAL3A6NHL2 446 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 IAPPP10997 89 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 OR2B8PP59922 312 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 ASCL5Q7RTU5 278 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 OR5AP2Q8NGF4 316 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 TMEM210A6NLX4 147 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 PATE4P0C8F1 98 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 GZMKP49863 264 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 ETFDHQ16134 617 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 MPV17LQ2QL34 196 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 OR5A2Q8NGI9 324 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 HES4Q9HCC6 221 aa11.9□□□□□ -0.5
LDB3-202ENST00000361373 ZNF107Q9UII5 783 aaPredicted RBP11.9□□□□□ -0.5
LDB3-202ENST00000361373 H3BMH7 237 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 ADAM20O43506 726 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 GZMHP20718 246 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 TMPRSS3P57727 454 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 LYG1Q8N1E2 194 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 FAAP24Q9BTP7 215 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 CHRDL1Q9BU40 450 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 AHCTF1Q8WYP5 2266 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 DXOO77932 396 aaKnown RBP11.89□□□□□ -0.51
LDB3-202ENST00000361373 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
LDB3-202ENST00000361373 VSTM2AQ8TAG5 236 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 ABHD3Q8WU67 409 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 MRPS18AQ9NVS2 196 aaKnown RBP11.89□□□□□ -0.51
LDB3-202ENST00000361373 XKRY2A2RUG3 117 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 OR4C45A6NMZ5 311 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 PYCARD-AS1I3L0S3 204 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 TRAF3IP2O43734 574 aaPredicted RBP11.89□□□□□ -0.51
LDB3-202ENST00000361373 CYTIPO60759 359 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 IGLV3-19P01714 112 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 FGF2P09038 288 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 RRASP10301 218 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 HOXB1P14653 301 aaPredicted RBP11.89□□□□□ -0.51
LDB3-202ENST00000361373 ZNF816Q0VGE8 651 aaPredicted RBP11.89□□□□□ -0.51
LDB3-202ENST00000361373 AARDQ4LEZ3 155 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 TMEM41BQ5BJD5 291 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 C20orf196Q8IYI0 205 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 TMED6Q8WW62 240 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 MAP6Q96JE9 813 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 THYN1Q9P016 225 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 TUBGCP6Q96RT7 1819 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 AQP7O14520 342 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 CALCRP30988 508 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 OR3A4PP47883 348 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 C1orf185Q5T7R7 199 aa11.89□□□□□ -0.51
LDB3-202ENST00000361373 SFTPA2Q8IWL1 248 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms