RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 NTNG2Q96CW9 530 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 ADAT3Q96EY9 351 aaPredicted RBP11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 MYO5AQ9Y4I1 1855 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 LAT2Q9GZY6 243 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 S1PR5Q9H228 398 aa11.89□□□□□ -0.51
SRGAP3-201ENST00000360413 G6PCP35575 357 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 RHOBP62745 196 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 LSM11P83369 360 aaKnown RBP eCLIP11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 OLIG3Q7RTU3 272 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 MS4A8Q9BY19 250 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 GPR84Q9NQS5 396 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 MAP1LC3B2A6NCE7 125 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 TAPBPO15533 448 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 EIF3IQ13347 325 aaKnown RBP11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 WFDC8Q8IUA0 241 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 ZDHHC22Q8N966 263 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 SLAMF6Q96DU3 332 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 MAP1LC3BQ9GZQ8 125 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 B4DEV8 164 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 SP1P08047 785 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 CD22P20273 847 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 SLC6A1P30531 599 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 KIR3DL2P43630 455 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 DLK1P80370 383 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF273Q14593 569 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 FAM27D1Q5T7N8 215 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 LEMD1Q68G75 181 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 ANKRD34AQ69YU3 496 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 ADPRHL1Q8NDY3 354 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 OR4A4PQ8NGN8 299 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 TXNRD2Q9NNW7 524 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF253O75346 499 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 WNT1P04628 370 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 C19orf57Q0VDD7 668 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 RAB40CQ96S21 281 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 MS4A7Q9GZW8 240 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 PLEKHB1Q9UF11 243 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 FABP2P12104 132 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 DHRS2Q13268 280 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 SEZ6L2Q6UXD5 910 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 NPEPL1Q8NDH3 523 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 OR1L6Q8NGR2 347 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 RPEQ96AT9 228 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 ACY3Q96HD9 319 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 OR4C12Q96R67 309 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF749O43361 778 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 BCL3P20749 454 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 LBX1P52954 281 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 MOB3BQ86TA1 216 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 STPG2Q8N412 459 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 SIRT7Q9NRC8 400 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 SLC7A10Q9NS82 523 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 WSB2Q9NYS7 404 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 USP3Q9Y6I4 520 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 SIRPB1O00241 398 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 LANCL1O43813 399 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 OPRK1P41145 380 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 MARCH3Q86UD3 253 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 TBX15Q96SF7 602 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 MANBALQ9NQG1 85 aa11.88□□□□□ -0.51
SRGAP3-201ENST00000360413 MPC2O95563 127 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 SFTPCP11686 197 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 DLX1P56177 255 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 OR4C46A6NHA9 309 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 CEBPDP49716 269 aaPredicted RBP11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 SLC37A1P57057 533 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF385BQ569K4 471 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 TMEM179BQ7Z7N9 219 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 TMEM116Q8NCL8 245 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 RSG1Q9BU20 258 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 TCRBV5S2A0A599 114 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 ARRDC5A6NEK1 342 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 COX6CP09669 75 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 ERASQ7Z444 233 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 FAM131CQ96AQ9 280 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 DIRC3C9JPN6 131 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 SLC25A5P05141 298 aaKnown RBP11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 HTRA3P83110 453 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 SHBQ15464 509 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 OR1C1Q15619 314 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 GFRALQ6UXV0 394 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 GPA33Q99795 319 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 MARVELD1Q9BSK0 173 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 TAAR3PQ9P1P4 343 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 LNP1A1A4G5 178 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 GPANK1O95872 356 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 CSN3P07498 182 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 FPR2P25090 351 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 COMPP49747 757 aaPredicted RBP11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 FOXO1Q12778 655 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF750Q32MQ0 723 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 SLCO4C1Q6ZQN7 724 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 ARRDC1Q8N5I2 433 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 RHNO1Q9BSD3 238 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 ZNF250P15622 560 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 SYS1Q8N2H4 156 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 SLC25A22Q9H936 323 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 SLC17A5Q9NRA2 495 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 TMED3Q9Y3Q3 217 aa11.87□□□□□ -0.51
SRGAP3-201ENST00000360413 OR51B4Q9Y5P0 310 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms