RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 TRIM43Q96BQ3 446 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 CPNE2Q96FN4 548 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 REEP6Q96HR9 211 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 AKR1E2Q96JD6 320 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 ZNF668Q96K58 619 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 TMEM208Q9BTX3 173 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 GPR87Q9BY21 358 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 NKX2-4Q9H2Z4 354 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 SLC2A4RGQ9NR83 387 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 NAT8Q9UHE5 227 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 DHDHQ9UQ10 334 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 VDAC3Q9Y277 283 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 NOP16Q9Y3C1 178 aaKnown RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 RAI1Q7Z5J4 1906 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 ZC3H12DA2A288 527 aaKnown RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 OR2W5A6NFC9 320 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 NKX6-3A6NJ46 265 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 C9JCJ5 164 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 DHHO43323 396 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 RAMP1O60894 148 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 DKK1O94907 266 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 HRASP01112 189 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 IFNA21P01568 189 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 BCL2P10415 239 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 CCR2P41597 374 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 AFF3P51826 1226 aaKnown RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 AKR1D1P51857 326 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 SNRPNP63162 240 aaKnown RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 SMAD3P84022 425 aaKnown RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 GUCA2AQ02747 115 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 KLF5Q13887 457 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 DAZAP2Q15038 168 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 HNRNPA1L2Q32P51 320 aaKnown RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 C14orf28Q4W4Y0 310 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 GLYATL3Q5SZD4 288 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 TMEM211Q6ICI0 200 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 ZNF585AQ6P3V2 769 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 SLC25A47Q6Q0C1 308 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 C17orf82Q86X59 251 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 OR51D1Q8NGF3 324 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 ZPLD1Q8TCW7 415 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 ST8SIA1Q92185 356 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 IRF7Q92985 503 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 SEPSECSQ9HD40 501 aaKnown RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 TM7SF3Q9NS93 570 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 OR6C3Q9NZP0 311 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 LRP12Q9Y561 859 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 WSB1Q9Y6I7 421 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 TRAV18A0A075B6X5 111 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 NSG1A0A0A6YYJ2 146 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 IGHV2-70DA0A0C4DH43 119 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 ALG1L2C9J202 215 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 FHITP49789 147 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 TMEM50BP56557 158 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 ZP2Q05996 745 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 FAM53BQ14153 422 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 ELAVL3Q14576 367 aaKnown RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 C9orf50Q5SZB4 431 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 C9orf135Q5VTT2 229 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 RFLNAQ6ZTI6 216 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 LANCL3Q6ZV70 420 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 GCNT2Q8N0V5 402 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 OR4N2Q8NGD1 307 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 OR4X1Q8NH49 305 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 MFSD8Q8NHS3 518 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 FRZBQ92765 325 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 RELTQ969Z4 430 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 SPSB4Q96A44 273 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 ATP5SQ99766 215 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 GABRG3Q99928 467 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 ADAT1Q9BUB4 502 aaKnown RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 PLEKHF2Q9H8W4 249 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 TREM1Q9NP99 234 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 POLR3KQ9Y2Y1 108 aaPredicted RBP3.93□□□□□ -1.78
PTPN22-201ENST00000359785 IER3IP1Q9Y5U9 82 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 MYOFQ9NZM1 2061 aa3.93□□□□□ -1.78
PTPN22-201ENST00000359785 CDIPTO14735 213 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 DNPH1O43598 174 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 TSPAN15O95858 294 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 TTRP02766 147 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 OR4Q2P0C623 313 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 FUT1P19526 365 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 FCGR2CP31995 323 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 SFTPDP35247 375 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 HRH1P35367 487 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 APLNRP35414 380 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 SSR2P43308 183 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 DGKEP52429 567 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 ARG2P78540 354 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 TLE4Q04727 773 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 TAF9Q16594 264 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 CLEC12AQ5QGZ9 265 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 PRSS57Q6UWY2 283 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 SGPP2Q8IWX5 399 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 SEMA6DQ8NFY4 1073 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 OR4S1Q8NGB4 309 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 OR4B1Q8NGF8 309 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 ADIPOR1Q96A54 375 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 HES4Q9HCC6 221 aa3.92□□□□□ -1.78
PTPN22-201ENST00000359785 KCNJ16Q9NPI9 418 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms