RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 FOLR2P14207 255 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 RAB4AP20338 218 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 DDTP30046 118 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 GDNFP39905 211 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 NUTF2P61970 127 aaKnown RBP11.01□□□□□ -0.65
GGPS1-202ENST00000358966 S100A16Q96FQ6 103 aaKnown RBP11.01□□□□□ -0.65
GGPS1-202ENST00000358966 TAAR6Q96RI8 345 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 PRRX2Q99811 253 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 CACNG6Q9BXT2 260 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 PRDM13Q9H4Q3 707 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 ZDHHC11Q9H8X9 412 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 PLEKHA1Q9HB21 404 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 BARX1Q9HBU1 254 aaPredicted RBP11.01□□□□□ -0.65
GGPS1-202ENST00000358966 FAM212BQ9NTI7 297 aaPredicted RBP11.01□□□□□ -0.65
GGPS1-202ENST00000358966 TP53TG5Q9Y2B4 290 aa11.01□□□□□ -0.65
GGPS1-202ENST00000358966 TPRP12270 2363 aaKnown RBP11.01□□□□□ -0.65
GGPS1-202ENST00000358966 A0A087X0M5 115 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 A0A1B0GX30 115 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 RFPL4AA6NLU0 287 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 RFPL4AL1F8VTS6 287 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 SYNGR3O43761 229 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 CALCBP10092 127 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 ZNF20P17024 532 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 TAS2R20P59543 309 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 GRB2P62993 217 aaKnown RBP11□□□□□ -0.65
GGPS1-202ENST00000358966 PEA15Q15121 130 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 FAM166AQ6J272 317 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 CLEC2AQ6UVW9 174 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 CPEB3Q8NE35 698 aaKnown RBP11□□□□□ -0.65
GGPS1-202ENST00000358966 CCDC54Q8NEL0 328 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 SUCNR1Q9BXA5 334 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 FAM117AQ9C073 453 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 TOLLIPQ9H0E2 274 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 ATG5Q9H1Y0 275 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 IGKV1-9A0A0C4DH69 117 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 A0A1W2PR80 420 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 PPIHO43447 177 aaKnown RBP11□□□□□ -0.65
GGPS1-202ENST00000358966 RAB3DO95716 219 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 FSTP19883 344 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 ACKR3P25106 362 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 DCTDP32321 178 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 RTP5Q14D33 572 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 LBHQ53QV2 105 aaPredicted RBP11□□□□□ -0.65
GGPS1-202ENST00000358966 GLT8D1Q68CQ7 371 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 Q6ZTK2 550 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 TOMM5Q8N4H5 51 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 ACBD4Q8NC06 268 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 CPT1CQ8TCG5 803 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 SLC25A32Q9H2D1 315 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 ACKR4Q9NPB9 350 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 PIPOXQ9P0Z9 390 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 RHBDD3Q9Y3P4 386 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 ZGRF1Q86YA3 2104 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 PIEZO1Q92508 2521 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 TRAV18A0A075B6X5 111 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 LDLRAD4O15165 306 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 HEXAP06865 529 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 BDKRB2P30411 391 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 OR3A4PP47883 348 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 MMP15P51511 669 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 SEC61A1P61619 476 aaKnown RBP11□□□□□ -0.65
GGPS1-202ENST00000358966 HIST1H3AP68431 136 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 HIST2H3PS2Q5TEC6 136 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 HIST2H3AQ71DI3 136 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 OR5AS1Q8N127 324 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 SMIM4Q8WVI0 70 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 RNF122Q9H9V4 155 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 NKIRAS2Q9NYR9 191 aa11□□□□□ -0.65
GGPS1-202ENST00000358966 IGKV3D-15A0A087WSY6 115 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 LOC100289279A0A1B0GTE1 492 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 ZNF891A8MT65 544 aaPredicted RBP10.99□□□□□ -0.65
GGPS1-202ENST00000358966 IGHV2-5P01817 119 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 LCATP04180 440 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 CRYGSP22914 178 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 BLOC1S1P78537 153 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 HIKESHIQ53FT3 197 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 NCMAPQ5T1S8 102 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 SFRP4Q6FHJ7 346 aaPredicted RBP10.99□□□□□ -0.65
GGPS1-202ENST00000358966 ZNF627Q7L945 461 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 MCEMP1Q8IX19 187 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 ATG101Q9BSB4 218 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 SCNM1Q9BWG6 230 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 OR2H1Q9GZK4 316 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 TLNRD1Q9H1K6 362 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 OR51B6Q9H340 312 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 CA10Q9NS85 328 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 MGAT4CQ9UBM8 478 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 SLC22A20A6NK97 555 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 OTX1P32242 354 aaPredicted RBP10.99□□□□□ -0.65
GGPS1-202ENST00000358966 UNC119Q13432 240 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 OR8G1Q15617 311 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 IGF2-ASQ6U949 168 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 LYPD6Q86Y78 171 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 ZNF100Q8IYN0 542 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 OR14K1Q8NGZ2 314 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 OR1F12Q8NHA8 337 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 PIGTQ969N2 578 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 APH1AQ96BI3 265 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 SLC17A5Q9NRA2 495 aa10.99□□□□□ -0.65
GGPS1-202ENST00000358966 UPB1Q9UBR1 384 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms