RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 PPT1P50897 306 aa12.46□□□□□ -0.41
SIRPA-202ENST00000358771 BAP18Q8IXM2 172 aa12.46□□□□□ -0.41
SIRPA-202ENST00000358771 OR14K1Q8NGZ2 314 aa12.46□□□□□ -0.41
SIRPA-202ENST00000358771 CHST5Q9GZS9 411 aa12.46□□□□□ -0.41
SIRPA-202ENST00000358771 GPR35Q9HC97 309 aa12.46□□□□□ -0.41
SIRPA-202ENST00000358771 SLC22A20A6NK97 555 aa12.46□□□□□ -0.42
SIRPA-202ENST00000358771 SIRPB1O00241 398 aa12.46□□□□□ -0.42
SIRPA-202ENST00000358771 FUT6P51993 359 aa12.46□□□□□ -0.42
SIRPA-202ENST00000358771 ZNF169Q14929 603 aaPredicted RBP12.46□□□□□ -0.42
SIRPA-202ENST00000358771 RTN4RL2Q86UN3 420 aa12.46□□□□□ -0.42
SIRPA-202ENST00000358771 TMEM105Q8N8V8 129 aa12.46□□□□□ -0.42
SIRPA-202ENST00000358771 MED19A0JLT2 244 aaPredicted RBP12.45□□□□□ -0.42
SIRPA-202ENST00000358771 C5orf63A6NC05 138 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 HPNP05981 417 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 ZNF92Q03936 586 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 PAN3Q58A45 887 aaKnown RBP12.45□□□□□ -0.42
SIRPA-202ENST00000358771 FAM27BQ5VT28 67 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 SLC25A42Q86VD7 318 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 SKA3Q8IX90 412 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 ZDHHC23Q8IYP9 409 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 KCNRGQ8N5I3 272 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 RNF141Q8WVD5 230 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 ESRP2Q9H6T0 727 aaKnown RBP12.45□□□□□ -0.42
SIRPA-202ENST00000358771 NPDC1Q9NQX5 325 aaPredicted RBP12.45□□□□□ -0.42
SIRPA-202ENST00000358771 H3BUI4 141 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 FABP6P51161 128 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 TIPARPQ7Z3E1 657 aaKnown RBP12.45□□□□□ -0.42
SIRPA-202ENST00000358771 EXTL1Q92935 676 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 OR2H1Q9GZK4 316 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 GPR160Q9UJ42 338 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 AKAP6Q13023 2319 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 TRGV5A0A0B4J1U4 118 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 A0A1B0GTI1 187 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 LYZL6O75951 148 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 CA6P23280 308 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 SUCLG1P53597 346 aaKnown RBP12.45□□□□□ -0.42
SIRPA-202ENST00000358771 AADACL3Q5VUY0 350 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 OR2M7Q8NG81 312 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 TAF9BQ9HBM6 251 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 KCNIP1Q9NZI2 227 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 FOXJ2Q9P0K8 574 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 CUL9Q8IWT3 2517 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 TRAV39A0A0B4J263 110 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 SPAARA0A1B0GVQ0 90 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 PLSCR5A0PG75 271 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 BCL2L11O43521 198 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 WDR1O75083 606 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 FPR2P25090 351 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 GCH1P30793 250 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 RAB2AP61019 212 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 TFAP2EQ6VUC0 442 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 C2orf50Q96LR7 162 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 OCSTAMPQ9BR26 566 aa12.45□□□□□ -0.42
SIRPA-202ENST00000358771 SF3B5Q9BWJ5 86 aaKnown RBP12.45□□□□□ -0.42
SIRPA-202ENST00000358771 HMSDA8MTL9 139 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 TOR1AO14656 332 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 PRDX4Q13162 271 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 DEFB109BQ30KR1 87 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 HIKESHIQ53FT3 197 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 LGI3Q8N145 548 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 IER2Q9BTL4 223 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 SSX5O60225 188 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 SFT2D2O95562 160 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 FUT3P21217 361 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 RPL12P30050 165 aaKnown RBP12.44□□□□□ -0.42
SIRPA-202ENST00000358771 IL2RGP31785 369 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 PMP22Q01453 160 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 TMEM88Q6PEY1 159 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 WDFY1Q8IWB7 410 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 ZBTB44Q8NCP5 570 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 AQP3Q92482 292 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 MARC2Q969Z3 335 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 LINC00052Q96N35 136 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 MS4A7Q9GZW8 240 aaPredicted RBP12.44□□□□□ -0.42
SIRPA-202ENST00000358771 SLC26A1Q9H2B4 701 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 AK3Q9UIJ7 227 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 PRELID1Q9Y255 219 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 DEGS1O15121 323 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 TRIP6Q15654 476 aaKnown RBP12.44□□□□□ -0.42
SIRPA-202ENST00000358771 OR2B11Q5JQS5 317 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 PLAC9Q5JTB6 97 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 LRRC46Q96FV0 321 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 PLPPR2Q96GM1 343 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 RGCCQ9H4X1 137 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 PIPOXQ9P0Z9 390 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 DNAJB11Q9UBS4 358 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 ANXA10Q9UJ72 324 aa12.44□□□□□ -0.42
SIRPA-202ENST00000358771 H3BP45 60 aa12.43□□□□□ -0.42
SIRPA-202ENST00000358771 TIMM8AO60220 97 aaPredicted RBP12.43□□□□□ -0.42
SIRPA-202ENST00000358771 RRASP10301 218 aa12.43□□□□□ -0.42
SIRPA-202ENST00000358771 MPPED2Q15777 294 aa12.43□□□□□ -0.42
SIRPA-202ENST00000358771 ZNF766Q5HY98 468 aa12.43□□□□□ -0.42
SIRPA-202ENST00000358771 ZSCAN4Q8NAM6 433 aaPredicted RBP12.43□□□□□ -0.42
SIRPA-202ENST00000358771 CCDC54Q8NEL0 328 aa12.43□□□□□ -0.42
SIRPA-202ENST00000358771 MITD1Q8WV92 249 aa12.43□□□□□ -0.42
SIRPA-202ENST00000358771 SPIN2AQ99865 258 aa12.43□□□□□ -0.42
SIRPA-202ENST00000358771 SPIN2BQ9BPZ2 258 aa12.43□□□□□ -0.42
SIRPA-202ENST00000358771 FZR1Q9UM11 496 aa12.43□□□□□ -0.42
SIRPA-202ENST00000358771 B4E171 279 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms