RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 WDFY1Q8IWB7 410 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 OR2G2Q8NGZ5 317 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 ZCCHC14Q8WYQ9 949 aaKnown RBP6.5□□□□□ -1.37
VPS13A-202ENST00000357409 RAB1CQ92928 201 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 RAXQ9Y2V3 346 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 SP1P08047 785 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 ADH4P08319 380 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 ZDHHC11BP0C7U3 371 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 MTNR1BP49286 362 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 NXPH1P58417 271 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 OXA1LQ15070 435 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 TMEM147Q9BVK8 224 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 LPAR5Q9H1C0 372 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 CNOT2Q9NZN8 540 aaKnown RBP6.5□□□□□ -1.37
VPS13A-202ENST00000357409 GSCP56915 257 aaPredicted RBP6.5□□□□□ -1.37
VPS13A-202ENST00000357409 LINC00303Q3SY05 128 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 C5orf17Q8NAS9 161 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 FDCSPQ8NFU4 85 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 SIRT5Q9NXA8 310 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 PHRF1Q9P1Y6 1649 aaKnown RBP6.5□□□□□ -1.37
VPS13A-202ENST00000357409 CD96P40200 585 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 GABARAPL2P60520 117 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 RHOXF1Q8NHV9 184 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 ARHGDIGQ99819 225 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 F12P00748 615 aaPredicted RBP6.5□□□□□ -1.37
VPS13A-202ENST00000357409 ACSF3Q4G176 576 aaPredicted RBP6.5□□□□□ -1.37
VPS13A-202ENST00000357409 OR4D11Q8NGI4 311 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 ZPBPQ9BS86 351 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 AMTP48728 403 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 LCN2P80188 198 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 CDH26Q8IXH8 852 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 SMIM12Q96EX1 92 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 MRGPRX4Q96LA9 322 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 PIK3C2AO00443 1686 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 OR5AC1P0C628 307 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 GPR6P46095 362 aaPredicted RBP6.5□□□□□ -1.37
VPS13A-202ENST00000357409 COL10A1Q03692 680 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 IZUMO4Q1ZYL8 232 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 SPICQ8N5J4 248 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 U3KQ87 197 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 UBR1Q8IWV7 1749 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 GIPP09681 153 aaPredicted RBP6.49□□□□□ -1.37
VPS13A-202ENST00000357409 TRAPPC2P0DI81 140 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 TRAPPC2BP0DI82 140 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 SSTR5P35346 364 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 DPTQ07507 201 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 TCEAL1Q15170 157 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 MDP1Q86V88 176 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 OR8G5Q8NG78 346 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 OR4P4Q8NGL7 312 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 TMEM38AQ9H6F2 299 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 SLA2Q9H6Q3 261 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 RAB18Q9NP72 206 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 GPX2P18283 190 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 C3orf36Q3SXR2 165 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 CLEC2AQ6UVW9 174 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 CD300LGQ6UXG3 332 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 DIMT1Q9UNQ2 313 aaKnown RBP6.49□□□□□ -1.37
VPS13A-202ENST00000357409 MYH13Q9UKX3 1938 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 ATP6V1G2-DDX39BF2Z307 99 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 MS4A18H0YCH9 400 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 TRIM77I1YAP6 450 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 TNFRSF1AP19438 455 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 S100A11P31949 105 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 MS4A18Q3C1V0 323 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 RNASEKQ6P5S7 137 aaKnown RBP6.49□□□□□ -1.37
VPS13A-202ENST00000357409 Q6ZNB5 142 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 LYSMD2Q8IV50 215 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 NIPSNAP3BQ9BS92 247 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 NTMQ9P121 344 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 C3P01024 1663 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 G3V3Q6 166 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 HBE1P02100 147 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 SP9P0CG40 484 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 TRAT1Q6PIZ9 186 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 PRNTQ86SH4 94 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 OR8B12Q8NGG6 310 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF596Q8TC21 504 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 TSPAN32Q96QS1 320 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 ACTR3CQ9C0K3 210 aaPredicted RBP6.49□□□□□ -1.37
VPS13A-202ENST00000357409 GLRX2Q9NS18 164 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 KIAA1324LA8MWY0 1029 aaPredicted RBP6.49□□□□□ -1.37
VPS13A-202ENST00000357409 CLDN14O95500 239 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 PDZK1IP1Q13113 114 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 SLC16A12Q6ZSM3 486 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 RTL10Q7L3V2 364 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF547Q8IVP9 402 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 OR13G1Q8NGZ3 307 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 BTF3L4Q96K17 158 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 MYO5BQ9ULV0 1848 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF142P52746 1687 aaPredicted RBP6.49□□□□□ -1.37
VPS13A-202ENST00000357409 RGPD8O14715 1765 aaPredicted RBP6.49□□□□□ -1.37
VPS13A-202ENST00000357409 MYH2Q9UKX2 1941 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 A0A0A6YYD5 115 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 TCRBV5S1A1TA0A578 114 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 PF4P02776 101 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 GABRB1P18505 474 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 FCARP24071 287 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 FUT6P51993 359 aa6.49□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF133P52736 654 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms