RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 SLC24A5Q71RS6 500 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 FAM89BQ8N5H3 189 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 C2orf73Q8N5S3 287 aaPredicted RBP6.76□□□□□ -1.33
CCR9-201ENST00000355983 VN1R2Q8NFZ6 395 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 OR2M7Q8NG81 312 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 TSSK2Q96PF2 358 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 PTPN18Q99952 460 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 CSTL1Q9H114 145 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 SRA1Q9HD15 236 aaKnown RBP6.76□□□□□ -1.33
CCR9-201ENST00000355983 G6PC2Q9NQR9 355 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 PRR13Q9NZ81 148 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 RNF150Q9ULK6 438 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 CLEC4EQ9ULY5 219 aa6.76□□□□□ -1.33
CCR9-201ENST00000355983 IGKV1D-42A0A075B6H8 117 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 NDUFB8O95169 186 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 UCP1P25874 307 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 EMDP50402 254 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 ENDOGQ14249 297 aaKnown RBP6.75□□□□□ -1.33
CCR9-201ENST00000355983 GNMTQ14749 295 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 C9orf50Q5SZB4 431 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 ETFRF1Q6IPR1 90 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 TIPARPQ7Z3E1 657 aaKnown RBP6.75□□□□□ -1.33
CCR9-201ENST00000355983 SULF2Q8IWU5 870 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 C20orf196Q8IYI0 205 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 ZNF248Q8NDW4 579 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 OR4D5Q8NGN0 318 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 TSPAN32Q96QS1 320 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 ZNF700Q9H0M5 742 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 SH3BGRL2Q9UJC5 107 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 LAMP3Q9UQV4 416 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 DOCK3Q8IZD9 2030 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 NPIPA5A0A0B4J1W7 369 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 MYADML2A6NDP7 307 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 OR6C6A6NF89 314 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 NPIPA7E9PJI5 369 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 TIAF1O95411 115 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 NPIPA8P0DM63 369 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 BMP5P22003 454 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 CEACAM8P31997 349 aaPredicted RBP6.75□□□□□ -1.33
CCR9-201ENST00000355983 ARR3P36575 388 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 PLAC9Q5JTB6 97 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 WDR25Q64LD2 544 aaPredicted RBP6.75□□□□□ -1.33
CCR9-201ENST00000355983 CNKSR3Q6P9H4 555 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 ZNF880Q6PDB4 577 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 CBLN3Q6UW01 205 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 OR2C3Q8N628 320 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 OR52N5Q8NH56 324 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 NKD1Q969G9 470 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 S1PR5Q9H228 398 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 PLEKHF2Q9H8W4 249 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 CALHM2Q9HA72 323 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 PTRH2Q9Y3E5 179 aaKnown RBP6.75□□□□□ -1.33
CCR9-201ENST00000355983 LRP12Q9Y561 859 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 SCN3AQ9NY46 2000 aa6.75□□□□□ -1.33
CCR9-201ENST00000355983 LOC105371242A0A075B767 164 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 TRAV30A0A087WSZ9 112 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 A0A0A6YYD4 124 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 SYNDIG1LA6NDD5 238 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 FOXI3A8MTJ6 420 aaPredicted RBP6.74□□□□□ -1.33
CCR9-201ENST00000355983 SERPINE3A8MV23 424 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 ZNF705FA8MVS1 300 aaPredicted RBP6.74□□□□□ -1.33
CCR9-201ENST00000355983 GPR89AB7ZAQ6 455 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 PRRT4C9JH25 899 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 TMEM238C9JI98 176 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 WDR1O75083 606 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 CDS2O95674 445 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 IFNA1P01562 189 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 GPR89BP0CG08 455 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 ZNF705DP0CH99 300 aaPredicted RBP6.74□□□□□ -1.33
CCR9-201ENST00000355983 ZNF705BP0CI00 300 aaPredicted RBP6.74□□□□□ -1.33
CCR9-201ENST00000355983 SMIM10L1P0DMW3 83 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 PI3P19957 117 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 RAB28P51157 221 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 TPPP2P59282 170 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 PTCRAQ6ISU1 281 aaPredicted RBP6.74□□□□□ -1.33
CCR9-201ENST00000355983 LRRC69Q6ZNQ3 347 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 C16orf82Q7Z2V1 217 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 LYG1Q8N1E2 194 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 ZFP62Q8NB50 900 aaPredicted RBP6.74□□□□□ -1.33
CCR9-201ENST00000355983 ZNF738Q8NE65 137 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 OR2I1PQ8NGU4 316 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 CTHRC1Q96CG8 243 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 SMIM10Q96HG1 83 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 COX14Q96I36 57 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 CAPNS2Q96L46 248 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 C1orf147Q96MC9 270 aaPredicted RBP6.74□□□□□ -1.33
CCR9-201ENST00000355983 VAMP8Q9BV40 100 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 LYRM4Q9HD34 91 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 MMP25Q9NPA2 562 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 EHFQ9NZC4 300 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 B9D1Q9UPM9 204 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 COX11Q9Y6N1 276 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 TRPM6Q9BX84 2022 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 LATO43561 262 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 GZMHP20718 246 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 GABRA3P34903 492 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 BMI1P35226 326 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 MPLP40238 635 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 GALR1P47211 349 aa6.74□□□□□ -1.33
CCR9-201ENST00000355983 TMEM50BP56557 158 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms