RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 FOXK2Q01167 660 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 FAM122BQ7Z309 247 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 KCNK17Q96T54 332 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 C6orf106Q9H6K1 298 aaPredicted RBP10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 IL21Q9HBE4 155 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 NPFFO15130 113 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 UCNP55089 124 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 PDZK1IP1Q13113 114 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 FZD2Q14332 565 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 LEXMQ3ZCV2 418 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 PELI3Q8N2H9 469 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 RFESDQ8TAC1 157 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 FAM222BQ8WU58 562 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 LINC01387J3KSC0 135 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 SHC1P29353 583 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 NHLRC1Q6VVB1 395 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 LTB4R2Q9NPC1 389 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 CEP250Q9BV73 2442 aa10.35□□□□□ -0.75
NUDCD3-202ENST00000355451 CORTO00230 105 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 CSNK1DP48730 415 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 EVX2Q03828 476 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 TMEM128Q5BJH2 165 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 RTN4IP1Q8WWV3 396 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 C16orf70Q9BSU1 422 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 NPFFR1Q9GZQ6 430 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 CNOT2Q9NZN8 540 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 SPRY1O43609 319 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 GPR3P46089 330 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 CCR6P51684 374 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 C1orf210Q8IVY1 113 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 PQLC3Q8N755 202 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 IGSF23A1L1A6 192 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 ICOSLGO75144 302 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 GPANK1O95872 356 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 OR2T2Q6IF00 324 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 LRRC29Q8WV35 223 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 Q96M85 177 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 PHLDA3Q9Y5J5 127 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 DNAJC15Q9Y5T4 150 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 BMP2P12643 396 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 OPRL1P41146 370 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 CEACAM16Q2WEN9 425 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 ADAMTSL4Q6UY14 1074 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 LRP11Q86VZ4 500 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 ZNF383Q8NA42 475 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 SCN9AQ15858 1988 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 GASTP01350 101 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 RAF1P04049 648 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 MYF5P13349 255 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 AVPR2P30518 371 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 HES3Q5TGS1 186 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 VSTM2AQ8TAG5 236 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 PKMYT1Q99640 499 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 ARHGEF28Q8N1W1 1705 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 IGHV3-43A0A0B4J1X8 118 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 ZNF205O95201 554 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 IGHV4-34P06331 123 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 IGHV3-43DP0DP04 118 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 TMPRSS3P57727 454 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 JOSD1Q15040 202 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 CLEC9AQ6UXN8 241 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 TCTEX1D1Q8N7M0 179 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 ALX4Q9H161 411 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 OR2D2Q9H210 308 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 MBD1Q9UIS9 605 aaPredicted RBP10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 RPL12P30050 165 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 ZNF137PP52743 207 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 LIM2P55344 173 aa10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 RBM45Q8IUH3 476 aaKnown RBP10.34□□□□□ -0.75
NUDCD3-202ENST00000355451 DNAJC25-GNG10A0A024R161 153 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 MRPS14O60783 128 aaKnown RBP10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 SBK3P0C264 359 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 ATP5J2P56134 94 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 RGP1Q92546 391 aaPredicted RBP10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 LYRM4Q9HD34 91 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 CHD3Q12873 2000 aaKnown RBP10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 HRH1P35367 487 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 UBE2L3P68036 154 aaKnown RBP10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 C19orf48Q6RUI8 117 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 MT-CO3P00414 261 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 FAM106CPP0CH98 169 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 ARRB2P32121 409 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 CD80P33681 288 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 MAS1LP35410 378 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 FAM71E1Q6IPT2 247 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 C16orf82Q7Z2V1 217 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 EML2O95834 649 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 TCTAP57738 103 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 RPS25P62851 125 aaKnown RBP10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 ZNF793Q6ZN11 406 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 IGDCC3Q8IVU1 814 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 ZNF740Q8NDX6 193 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 DNAJB12Q9NXW2 375 aaKnown RBP10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 HDGFL3Q9Y3E1 203 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 OR5B21A6NL26 309 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 SNHG28P0DPA3 235 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 WNT3P56703 355 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 SOX8P57073 446 aa10.33□□□□□ -0.76
NUDCD3-202ENST00000355451 PET117Q6UWS5 81 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms