RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 FLVCR1Q9Y5Y0 555 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 A0A1W2PNV4 684 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 MEX3AA1L020 520 aaKnown RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 AQP7P3A6NL99 342 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 NUDT19A8MXV4 375 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 K7EM74 188 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 NME2P1O60361 137 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 CDC14BO60729 498 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 CRYBA1P05813 215 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 GSTP1P09211 210 aaKnown RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 SPP1P10451 314 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 MUC1P15941 1255 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 NME2P22392 152 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 SLC6A9P48067 706 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 RAB32Q13637 225 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 PHYHD1Q5SRE7 291 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 AADACL3Q5VUY0 350 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ABHD12BQ7Z5M8 362 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 NAA40Q86UY6 237 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ZIC4Q8N9L1 334 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 GLYATL2Q8WU03 294 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 HAS2Q92819 552 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 CPNE2Q96FN4 548 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ARHGAP5-AS1Q96IT6 56 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF385AQ96PM9 386 aaKnown RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 AQP10Q96PS8 301 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 CMSS1Q9BQ75 279 aaKnown RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 FAM173AQ9BQD7 235 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 NRIP2Q9BQI9 281 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 MRPL13Q9BYD1 178 aaKnown RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 RHOFQ9HBH0 211 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ZFP57Q9NU63 452 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 COA4Q9NYJ1 87 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 RCC2Q9P258 522 aaKnown RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 HDGFL3Q9Y3E1 203 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 LHFPL6Q9Y693 200 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 NPIPB13A6NJU9 1138 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 NPIPB4C9JG80 1138 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 SDCBPO00560 298 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-204ENST00000353317 HTR3BO95264 441 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 FARS2O95363 451 aaKnown RBP7.49□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF20P17024 532 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 MEOX1P50221 254 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 PDZK1IP1Q13113 114 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 IL34Q6ZMJ4 242 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 PEG10Q86TG7 708 aaKnown RBP7.49□□□□□ -1.21
TRIM55-204ENST00000353317 COMMD2Q86X83 199 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 OR13G1Q8NGZ3 307 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 RXFP4Q8TDU9 374 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 C2CD4CQ8TF44 421 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 SMIM8Q96KF7 97 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 PIGQQ9BRB3 760 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 TMEM59Q9BXS4 323 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 SLC5A7Q9GZV3 580 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 KLK10O43240 276 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 CSTBP04080 98 aaKnown RBP7.49□□□□□ -1.21
TRIM55-204ENST00000353317 RPS2P15880 293 aaKnown RBP7.49□□□□□ -1.21
TRIM55-204ENST00000353317 GLRA1P23415 457 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 FPR2P25090 351 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 LAP3P28838 519 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 CDAP32320 146 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 KCNJ3P48549 501 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 TNFSF10P50591 281 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 CAV2P51636 162 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 C3AR1Q16581 482 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF239Q16600 458 aaKnown RBP7.49□□□□□ -1.21
TRIM55-204ENST00000353317 CARD17Q5XLA6 110 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 LHFPL1Q86WI0 220 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 ZFP82Q8N141 532 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 OR8B12Q8NGG6 310 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 KCNG3Q8TAE7 436 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 SLC25A43Q8WUT9 341 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-204ENST00000353317 OCSTAMPQ9BR26 566 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 METTL8Q9H825 291 aaKnown RBP7.49□□□□□ -1.21
TRIM55-204ENST00000353317 SEC61A2Q9H9S3 476 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 GPR84Q9NQS5 396 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 PRR14LQ5THK1 2151 aa7.49□□□□□ -1.21
TRIM55-204ENST00000353317 MFNGO00587 321 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 CXCL13O43927 109 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 CRTAPO75718 401 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 PGA4P0DJD7 388 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 PGA3P0DJD8 388 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 RCC1P18754 421 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 LPAR6P43657 344 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 LHX2P50458 406 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 B2MP61769 119 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 IL15RAQ13261 267 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 RPL7L1Q6DKI1 246 aaKnown RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 DMBX1Q8NFW5 382 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 OR5H2Q8NGV7 314 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 MAFIPQ8WZ33 124 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF837Q96EG3 531 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 FAM71F1Q96KD3 344 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ST6GALNAC5Q9BVH7 336 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 BIN3Q9NQY0 253 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 GSKIPQ9P0R6 139 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 IGKV1-9A0A0C4DH69 117 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF878C9JN71 531 aa7.48□□□□□ -1.21
TRIM55-204ENST00000353317 C9JQL5 133 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms