RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 AMBPP02760 352 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 RPS2P15880 293 aaKnown RBP6.72□□□□□ -1.33
BRCA1-201ENST00000352993 SFTPDP35247 375 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 MAS1LP35410 378 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 RUNX1Q01196 453 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF266Q14584 549 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 PCK2Q16822 640 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 GPR157Q5UAW9 335 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 NUP54Q7Z3B4 507 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 SNHG12Q9BXW3 62 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 MED29Q9NX70 200 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 SRPK3Q9UPE1 567 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 PIAS3Q9Y6X2 628 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 DVL1O14640 695 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 BGLAPP02818 100 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF728P0DKX0 622 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 RAB4AP20338 218 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 QRFPP83859 136 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 POU3F1Q03052 451 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF117Q03924 483 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 ADIRFQ15847 76 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 HLA-DQA1Q5Y7H0 255 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 NCR3LG1Q68D85 454 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 C6orf201Q7Z4U5 140 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 OR2AJ1Q8NGZ0 328 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 YPEL4Q96NS1 127 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 LANCL2Q9NS86 450 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 PPP1R14DQ9NXH3 145 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 XIRP2A4UGR9 3374 aa6.72□□□□□ -1.33
BRCA1-201ENST00000352993 A0A087WWC5 75 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 C17orf105B2RV13 164 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 H0Y8X5 98 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 K7N7A8 449 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 HCRTR1O43613 425 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 ISG15P05161 165 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 DUSP1P28562 367 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 NOVA1P51513 510 aaKnown RBP6.71□□□□□ -1.33
BRCA1-201ENST00000352993 SUCLG1P53597 346 aaKnown RBP6.71□□□□□ -1.33
BRCA1-201ENST00000352993 RRADP55042 308 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 PPP1CAP62136 330 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 EWSR1Q01844 656 aaKnown RBP eCLIP6.71□□□□□ -1.33
BRCA1-201ENST00000352993 GPM6BQ13491 265 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 SGCBQ16585 318 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 MYO7BQ6PIF6 2116 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 TMEM183AQ8IXX5 376 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF283Q8N7M2 679 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 OR5T1Q8NG75 326 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 OR1P1Q8NH06 330 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 MMABQ96EY8 250 aaPredicted RBP6.71□□□□□ -1.33
BRCA1-201ENST00000352993 HIST1H2AAQ96QV6 131 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 NXF5Q9H1B4 397 aaKnown RBP6.71□□□□□ -1.33
BRCA1-201ENST00000352993 GPR84Q9NQS5 396 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 GPR173Q9NS66 373 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 KIAA1456Q9P272 454 aa6.71□□□□□ -1.33
BRCA1-201ENST00000352993 CHD3Q12873 2000 aaKnown RBP6.71□□□□□ -1.34
BRCA1-201ENST00000352993 TMED7-TICAM2A0A0A6YYA0 188 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 MARCH11A6NNE9 402 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 TGFBR3LH3BV60 316 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 TGOLN2O43493 480 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 OR4A8P0C604 315 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 AKT2P31751 481 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 MMP16P51512 607 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 NUBP1P53384 320 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 ERVS71-1P61550 626 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 RPS21P63220 83 aaKnown RBP6.71□□□□□ -1.34
BRCA1-201ENST00000352993 FOXK1P85037 733 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 PAX5Q02548 391 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 FAM189A2Q15884 450 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 LILRA6Q6PI73 481 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 LCN15Q6UWW0 184 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 SPRED2Q7Z698 418 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 LHFPL1Q86WI0 220 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 PRSS58Q8IYP2 241 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 LGI3Q8N145 548 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 GPR137CQ8N3F9 429 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 OR10A7Q8NGE5 316 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 OR6X1Q8NH79 312 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 OR1E3Q8WZA6 343 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 IGKV1D-8A0A087WSZ0 117 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 SSSCA1O60232 199 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 HPNP05981 417 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 RABIFP47224 123 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 MRPS34P82930 218 aaKnown RBP6.71□□□□□ -1.34
BRCA1-201ENST00000352993 TLE4Q04727 773 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 ICAM4Q14773 271 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 MPV17LQ2QL34 196 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 CARD17Q5XLA6 110 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 FAM57BQ71RH2 274 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 ARHGEF39Q8N4T4 335 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 OR2C3Q8N628 320 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 OR5C1Q8NGR4 320 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 OR4X1Q8NH49 305 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 LIPHQ8WWY8 451 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 SCARF2Q96GP6 870 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-201ENST00000352993 CCNL2Q96S94 520 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-201ENST00000352993 TPSD1Q9BZJ3 242 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 OPN3Q9H1Y3 402 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-201ENST00000352993 SMDT1Q9H4I9 107 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 TUBD1Q9UJT1 453 aa6.71□□□□□ -1.34
BRCA1-201ENST00000352993 SLC17A4Q9Y2C5 497 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms