RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ZNF793Q6ZN11 406 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 SLC16A9Q7RTY1 509 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 FNDC9Q8TBE3 224 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 ABHD3Q8WU67 409 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 BCL2L2Q92843 193 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-203ENST00000349748 MOB3AQ96BX8 217 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 C4orf45Q96LM5 186 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 OR6C1Q96RD1 312 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 MTHFD2LQ9H903 347 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-203ENST00000349748 ZNF701Q9NV72 531 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-203ENST00000349748 NDUFS4O43181 175 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 CTSVO60911 334 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 NDUFB2O95178 105 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 DDAH2O95865 285 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 CFPP27918 469 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 ARHGAP11BQ3KRB8 267 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 TCEAL5Q5H9L2 206 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 TMEM64Q6YI46 380 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 C16orf82Q7Z2V1 217 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 UBE2E3Q969T4 207 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 APH1AQ96BI3 265 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 RPUSD4Q96CM3 377 aaKnown RBP9.37□□□□□ -0.91
CAPN3-203ENST00000349748 OR6C3Q9NZP0 311 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 GNG13Q9P2W3 67 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 C14orf166Q9Y224 244 aaKnown RBP9.37□□□□□ -0.91
CAPN3-203ENST00000349748 LAMTOR2Q9Y2Q5 125 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 YIPF1Q9Y548 306 aa9.37□□□□□ -0.91
CAPN3-203ENST00000349748 TRAV39A0A0B4J263 110 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 LINC01553A4QN01 128 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 HIDE1A8MVS5 230 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 FGF17O60258 216 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 ATP6V0CP27449 155 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 PSMB5P28074 263 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 CDKN2AP42771 156 aaKnown RBP9.36□□□□□ -0.91
CAPN3-203ENST00000349748 C1QL3Q5VWW1 255 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 OR6N2Q8NGY6 317 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 FGGYQ96C11 551 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 REEP6Q96HR9 211 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 WDR76Q9H967 626 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 CALHM2Q9HA72 323 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 TMEM106BQ9NUM4 274 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 PLA2G3Q9NZ20 509 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 B4GALT6Q9UBX8 382 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 TAC3Q9UHF0 121 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 IGHV2OR16-5A0A0B4J2B6 119 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 NBEAP1P0C6P0 100 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 CAPZBP47756 277 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
CAPN3-203ENST00000349748 SMAD3P84022 425 aaKnown RBP9.36□□□□□ -0.91
CAPN3-203ENST00000349748 ZNF92Q03936 586 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 RTP5Q14D33 572 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 EXOSC7Q15024 291 aaKnown RBP9.36□□□□□ -0.91
CAPN3-203ENST00000349748 ADIRFQ15847 76 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 DPY19L2P2Q6ZN68 376 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 Q6ZVL8 140 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 C9orf40Q8IXQ3 194 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 CXorf40AQ8TE69 158 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 GLYATL1Q969I3 302 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 FOXN4Q96NZ1 517 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 RASL10BQ96S79 203 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 SLC25A13Q9UJS0 675 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 MTCL1Q9Y4B5 1905 aaKnown RBP9.36□□□□□ -0.91
CAPN3-203ENST00000349748 C22orf46C9J442 243 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 LILRA1O75019 489 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 GCH1P30793 250 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 PTGER4P35408 488 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 BTN3A2P78410 334 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 TLE1Q04724 770 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 VAMP3Q15836 100 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 H1FOOQ8IZA3 346 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-203ENST00000349748 OR5L1Q8NGL2 311 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 OR13G1Q8NGZ3 307 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 THRSPQ92748 146 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 SDF2L1Q9HCN8 221 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 TMEM9BQ9NQ34 198 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 DHDHQ9UQ10 334 aa9.36□□□□□ -0.91
CAPN3-203ENST00000349748 CHD9Q3L8U1 2897 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 ZFP92A6NM28 416 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 DBHP09172 617 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 PSG1P11464 419 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 RBMXP38159 391 aaKnown RBP9.35□□□□□ -0.91
CAPN3-203ENST00000349748 DCAF4L2Q8NA75 395 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 PTPMT1Q8WUK0 201 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-203ENST00000349748 SLC25A44Q96H78 314 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-203ENST00000349748 EHFQ9NZC4 300 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 SERGEFQ9UGK8 458 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 NUP210LQ5VU65 1888 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 MYOFQ9NZM1 2061 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-203ENST00000349748 A0A1B0GWA3 101 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 E5RGE8 158 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 GALR2O43603 387 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-203ENST00000349748 LMX1BO60663 402 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 MPZL1O95297 269 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 IFNA21P01568 189 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 TMEM225BP0DP42 221 aa9.35□□□□□ -0.91
CAPN3-203ENST00000349748 DUSP3P51452 185 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-203ENST00000349748 RANP62826 216 aaKnown RBP9.35□□□□□ -0.91
CAPN3-203ENST00000349748 UNC119Q13432 240 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms