RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TRAV34A0A0B4J273 112 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 IGHA1P01876 353 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 IGHA2P01877 340 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 GUSBP08236 651 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 ZADH2Q8N4Q0 377 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 CORTO00230 105 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 CTAG2O75638 210 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 DHRS3O75911 302 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 ARSAP15289 507 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 BRS3P32247 399 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 P2RY1P47900 373 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 PAFAH1B2P68402 229 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 FAM53BQ14153 422 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 TMEM52BQ4KMG9 183 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 ZNF687Q8N1G0 1237 aa17.41■□□□□ 0.38
HDAC4-201ENST00000345617 ABCA4P78363 2273 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 SLC39A5Q6ZMH5 540 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 CXCL12P48061 93 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 C6orf201Q7Z4U5 140 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 SLC25A33Q9BSK2 321 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 GVINP1Q7Z2Y8 2422 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 CXorf65A6NEN9 183 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 CST7O76096 145 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 PNLIPRP2P54317 469 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 CD226Q15762 336 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 SLC25A26Q70HW3 274 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 FGF21Q9NSA1 209 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 SH3BGRL2Q9UJC5 107 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 GCGP01275 180 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 NOXO1Q8NFA2 376 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 TXNDC17Q9BRA2 123 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 CHRNA10Q9GZZ6 450 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 HOXA6P31267 233 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 OR2C3Q8N628 320 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 ZNF385DQ9H6B1 395 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 SPNP16150 400 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 ADTRPQ96IZ2 230 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 TWSG1Q9GZX9 223 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 TBX21Q9UL17 535 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 PTPRFP10586 1907 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 MYADML2A6NDP7 307 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 TTRP02766 147 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 TGFBR1P36897 503 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 MOB3AQ96BX8 217 aa17.4■□□□□ 0.38
HDAC4-201ENST00000345617 OPRK1P41145 380 aa17.39■□□□□ 0.38
HDAC4-201ENST00000345617 MAMSTRQ6ZN01 415 aa17.39■□□□□ 0.38
HDAC4-201ENST00000345617 CA10Q9NS85 328 aa17.39■□□□□ 0.38
HDAC4-201ENST00000345617 LANCL1O43813 399 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 SLC25A5P05141 298 aaKnown RBP17.39■□□□□ 0.37
HDAC4-201ENST00000345617 RDH5Q92781 318 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 PRO1933Q9H354 126 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 WASHC3Q9Y3C0 194 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 MT-ND6P03923 174 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 PPP1R1AQ13522 171 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 SLC25A35Q3KQZ1 300 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 LSM11P83369 360 aaKnown RBP eCLIP17.39■□□□□ 0.37
HDAC4-201ENST00000345617 PAQR6Q6TCH4 344 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 GJB3O75712 270 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 HIST1H1DP16402 221 aaKnown RBP17.39■□□□□ 0.37
HDAC4-201ENST00000345617 C19orf57Q0VDD7 668 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 ADAM20O43506 726 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 TNFRSF1AP19438 455 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 UBE2V2Q15819 145 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 POM121Q96HA1 1249 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 QSER1Q2KHR3 1735 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 LINC00862A6NCI5 91 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 B4GALT3O60512 393 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 NOVP48745 357 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 OR10G8Q8NGN5 311 aa17.39■□□□□ 0.37
HDAC4-201ENST00000345617 SFT2D2O95562 160 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 ATF1P18846 271 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 BSXQ3C1V8 233 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 NKAIN1Q4KMZ8 207 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 ZNF195O14628 629 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 GOSR1O95249 250 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 NHLRC1Q6VVB1 395 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 AMMECR1Q9Y4X0 333 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-201ENST00000345617 ACACAQ13085 2346 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 EDN3P14138 238 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 TMEM267Q0VDI3 215 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-201ENST00000345617 SRSF9Q13242 221 aaKnown RBP eCLIP17.38■□□□□ 0.377e-6■■■■□ 20
HDAC4-201ENST00000345617 TTC32Q5I0X7 151 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 SLCO1C1Q9NYB5 712 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 VAX2Q9UIW0 290 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 ANXA10Q9UJ72 324 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 ACP1P24666 158 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 TMPRSS13Q9BYE2 586 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-201ENST00000345617 HIST1H1EP10412 219 aaKnown RBP17.38■□□□□ 0.37
HDAC4-201ENST00000345617 PMCHL1Q16048 86 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 C20orf196Q8IYI0 205 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 C12orf49Q9H741 205 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 RALGAPA2Q2PPJ7 1873 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 NSUN5P2Q63ZY6 315 aa17.38■□□□□ 0.37
HDAC4-201ENST00000345617 TMEM272A0A1B0GTI8 110 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 A0A1W2PR48 441 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 CARFQ8N187 725 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 IL22RA2Q969J5 263 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 HMX2A2RU54 273 aa17.37■□□□□ 0.37
HDAC4-201ENST00000345617 MLF1P58340 268 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms