RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CPT2P23786 658 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 HRH1P35367 487 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 UCNP55089 124 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 SNU13P55769 128 aaKnown RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 GNG2P59768 71 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 RRAS2P62070 204 aaPredicted RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 HOXA4Q00056 320 aaPredicted RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 SSBP1Q04837 148 aaKnown RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 FCN2Q15485 313 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 PXT1Q8NFP0 134 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 STEAP2Q8NFT2 490 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 MARS2Q96GW9 593 aaKnown RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 GINS4Q9BRT9 223 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 EIF3KQ9UBQ5 218 aaKnown RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 ZNF221Q9UK13 617 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 POLEQ07864 2286 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 IGHV2OR16-5A0A0B4J2B6 119 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 EEF1E1-BLOC1S5C9J1V9 151 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 PEX14O75381 377 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 RHBDL1O75783 438 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 SCGNO76038 276 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 DHFRP00374 187 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 CCKARP32238 428 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 ZNF83P51522 516 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 Q6ZPA2 131 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 OSR2Q8N2R0 312 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 C17orf78Q8N4C9 275 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 DRAXINQ8NBI3 349 aaPredicted RBP11.6□□□□□ -0.55
CDC42-202ENST00000344548 OR11H7Q8NGC8 314 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 OR10AD1Q8NGE0 317 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 OR52B4Q8NGK2 314 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 OR13C8Q8NGS7 320 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 TECTBQ96PL2 329 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 SFXN3Q9BWM7 321 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 NPDC1Q9NQX5 325 aaPredicted RBP11.6□□□□□ -0.55
CDC42-202ENST00000344548 ST3GAL6Q9Y274 331 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 ANKRD30BLA7E2S9 258 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 SMLR1H3BR10 107 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 PMP2P02689 132 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 ARFRP1Q13795 201 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 MICBQ29980 383 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 HAGHLQ6PII5 290 aaPredicted RBP11.6□□□□□ -0.55
CDC42-202ENST00000344548 BPIFB2Q8N4F0 458 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 RELL2Q8NC24 303 aaPredicted RBP11.6□□□□□ -0.55
CDC42-202ENST00000344548 OR5A2Q8NGI9 324 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 CAPSLQ8WWF8 208 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 SULT4A1Q9BR01 284 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 ST6GALNAC5Q9BVH7 336 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 OPA3Q9H6K4 179 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 ANAPC10Q9UM13 185 aa11.6□□□□□ -0.55
CDC42-202ENST00000344548 ICE1Q9Y2F5 2266 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 FAM221AA4D161 298 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 DUSP1P28562 367 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 RCVRNP35243 200 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 MRPL49Q13405 166 aaKnown RBP11.59□□□□□ -0.55
CDC42-202ENST00000344548 SEZ6L2Q6UXD5 910 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 IDO2Q6ZQW0 420 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 C17orf107Q6ZR85 190 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 OR51J1Q9H342 316 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.59□□□□□ -0.553e-6■□□□□ 8
CDC42-202ENST00000344548 PLEKHJ1Q9NW61 149 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 IL36GQ9NZH8 169 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 KALRNO60229 2985 aa11.59□□□□□ -0.55
CDC42-202ENST00000344548 CHATP28329 748 aa11.58□□□□□ -0.55
CDC42-202ENST00000344548 FAUP35544 74 aaKnown RBP11.58□□□□□ -0.55
CDC42-202ENST00000344548 FABP6P51161 128 aa11.58□□□□□ -0.55
CDC42-202ENST00000344548 RAG2P55895 527 aa11.58□□□□□ -0.55
CDC42-202ENST00000344548 RBMS2Q15434 407 aaKnown RBP11.58□□□□□ -0.55
CDC42-202ENST00000344548 SCGB2B2Q4G0G5 96 aa11.58□□□□□ -0.55
CDC42-202ENST00000344548 SLC36A1Q7Z2H8 476 aa11.58□□□□□ -0.55
CDC42-202ENST00000344548 OCSTAMPQ9BR26 566 aa11.58□□□□□ -0.55
CDC42-202ENST00000344548 FN3KRPQ9HA64 309 aa11.58□□□□□ -0.55
CDC42-202ENST00000344548 IFT46Q9NQC8 304 aa11.58□□□□□ -0.55
CDC42-202ENST00000344548 AK3Q9UIJ7 227 aa11.58□□□□□ -0.55
CDC42-202ENST00000344548 TRAPPC2P0DI81 140 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 TRAPPC2BP0DI82 140 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 RAC2P15153 192 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 RBM11P57052 281 aaKnown RBP11.58□□□□□ -0.56
CDC42-202ENST00000344548 UBE2MP61081 183 aaKnown RBP11.58□□□□□ -0.56
CDC42-202ENST00000344548 NAAAQ02083 359 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 PNLIPRP3Q17RR3 467 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 TIMM23BQ5SRD1 257 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 Q6ZR03 302 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 C5orf24Q7Z6I8 188 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 FTMTQ8N4E7 242 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 Q8NFD4 153 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 EMG1Q92979 244 aaKnown RBP11.58□□□□□ -0.56
CDC42-202ENST00000344548 CPNE2Q96FN4 548 aaPredicted RBP11.58□□□□□ -0.56
CDC42-202ENST00000344548 ACTR6Q9GZN1 396 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 MPC1Q9Y5U8 109 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 SHANK1Q9Y566 2161 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 COL6A6A6NMZ7 2263 aa11.58□□□□□ -0.56
CDC42-202ENST00000344548 OR2AT4A6NND4 320 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 M0R1B8 84 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 MLNRO43193 412 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 ZNF780AO75290 641 aaPredicted RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 RLN1P04808 185 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 HOXD4P09016 255 aaPredicted RBP11.57□□□□□ -0.56
CDC42-202ENST00000344548 NAT1P18440 290 aa11.57□□□□□ -0.56
CDC42-202ENST00000344548 EIF2S3LQ2VIR3 472 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms